RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 OR56A4Q8NGH8 313 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 RIN3Q8TB24 985 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 RBM38Q9H0Z9 239 aaKnown RBP14.46□□□□□ -0.09
CNOT3-201ENST00000221232 NANOGQ9H9S0 305 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 SLC52A3Q9NQ40 469 aa14.46□□□□□ -0.09
CNOT3-201ENST00000221232 CNOT11Q9UKZ1 510 aaKnown RBP14.46□□□□□ -0.09
CNOT3-201ENST00000221232 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.1
CNOT3-201ENST00000221232 A0A1W2PQY0 241 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 E2F3O00716 465 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 DLGAP1O14490 977 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 TBL1XO60907 577 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 ZDHHC11BP0C7U3 371 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 G6PDP11413 515 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 HSPA7P48741 367 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 OR4D2P58180 307 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 TXNL4AP83876 142 aaKnown RBP14.46□□□□□ -0.1
CNOT3-201ENST00000221232 TNK2Q07912 1038 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 SELPLGQ14242 412 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 GPNMBQ14956 572 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 NR6A1Q15406 480 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 ATP6AP1LQ52LC2 224 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 TMCO2Q7Z6W1 182 aaPredicted RBP14.46□□□□□ -0.1
CNOT3-201ENST00000221232 SFRP1Q8N474 314 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 SPATA17Q96L03 361 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 ADGRE3Q9BY15 652 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 POPDC3Q9HBV1 291 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 TLR9Q9NR96 1032 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 AIG1Q9NVV5 245 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 ABCD2Q9UBJ2 740 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 MAGED1Q9Y5V3 778 aaPredicted RBP14.46□□□□□ -0.1
CNOT3-201ENST00000221232 CEPT1Q9Y6K0 416 aa14.46□□□□□ -0.1
CNOT3-201ENST00000221232 VWA8A3KMH1 1905 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 HNRNPRO43390 633 aaKnown RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 CLDN11O75508 207 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 CD160O95971 181 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 F11P03951 625 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 BMP2P12643 396 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 ZFP36L2P47974 494 aaKnown RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 CCL23P55773 120 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 RHOAP61586 193 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 PPP1R8Q12972 351 aaKnown RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 C11orf91Q3C1V1 193 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 PTRHD1Q6GMV3 140 aaKnown RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 DNAJC14Q6Y2X3 702 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 FIBCD1Q8N539 461 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 ANKFN1Q8N957 763 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 TFAP2CQ92754 450 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 SLC22A12Q96S37 553 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 NSUN3Q9H649 340 aaKnown RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 ARMC1Q9NVT9 282 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 ACTR3BQ9P1U1 418 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 SLC30A1Q9Y6M5 507 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 CROCCQ5TZA2 2017 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 FOXD2O60548 495 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 AOC2O75106 756 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 TTPAP49638 278 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 KPNA1P52294 538 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 DEFB128Q7Z7B8 93 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 PROKR1Q8TCW9 393 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 DDI1Q8WTU0 396 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 TRIM15Q9C019 465 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 CIPCQ9C0C6 399 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 DMTF1Q9Y222 760 aa14.45□□□□□ -0.1
CNOT3-201ENST00000221232 FNDC1Q4ZHG4 1894 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-201ENST00000221232 RSL1D1O76021 490 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ASLP04424 464 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ZNF23P17027 643 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 HOXB8P17481 243 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CDH2P19022 906 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MAPK10P53779 464 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 RFTN2Q52LD8 501 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PYCR3Q53H96 274 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 CXorf57Q6NSI4 855 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TMEM214Q6NUQ4 689 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 TBPL2Q6SJ96 375 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ANKS3Q6ZW76 656 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 LPCAT2Q7L5N7 544 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 OR4F6Q8NGB9 312 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 WFDC5Q8TCV5 224 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 AUTS2Q8WXX7 1259 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PEX13Q92968 403 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 EGFL8Q99944 293 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ADI1Q9BV57 179 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 RPF2Q9H7B2 306 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ZFP14Q9HCL3 533 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 FARSBQ9NSD9 589 aaKnown RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PNPLA3Q9NST1 481 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ZNHIT2Q9UHR6 403 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 PKP3Q9Y446 797 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 POLR3HQ9Y535 204 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MATN4O95460 622 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MLYCDO95822 493 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 HSD17B1P14061 328 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 SLC2A4P14672 509 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 HMGCS1Q01581 520 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 MERTKQ12866 999 aa14.44□□□□□ -0.1
CNOT3-201ENST00000221232 ABRAXAS2Q15018 415 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms