RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 J3KR12 359 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 PROCP04070 461 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 DRD1P21728 446 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 FBXO43Q4G163 708 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 DGKKQ5KSL6 1271 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SLC36A4Q6YBV0 504 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 DPP10Q8N608 796 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 RIBC2Q9H4K1 309 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CHRAC1Q9NRG0 131 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 PIGVQ9NUD9 493 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CAB39Q9Y376 341 aaPredicted RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 HNF1BP35680 557 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 FASTKQ14296 549 aaKnown RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 TRIM69Q86WT6 500 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 RLN3Q8WXF3 142 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 L2HGDHQ9H9P8 463 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 NDUFAF1Q9Y375 327 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 FCHO1O14526 889 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 THRAP10827 490 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 ATP6V0D1P61421 351 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 LMAN2Q12907 356 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SLC44A4Q53GD3 710 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 PLD5Q8N7P1 536 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 AVL9Q8NBF6 648 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 TSACCQ96A04 125 aaPredicted RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 IQCMA0A1B0GVH7 501 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CCKBRP32239 447 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 RUNX1T1Q06455 604 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 CA9Q16790 459 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 TRIM74Q86UV6 250 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 ZNF75CPQ92670 426 aaPredicted RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 ASB2Q96Q27 587 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CDRT15Q96T59 188 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CCDC134Q9H6E4 229 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CLCA3PQ9Y6N3 262 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 A0A0G2JN53 185 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SLC28A1O00337 649 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 PIRO00625 290 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 WFS1O76024 890 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CLDN7O95471 211 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SERPINE1P05121 402 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 CCND1P24385 295 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 MRPS22P82650 360 aaKnown RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 TAF1AQ15573 450 aaPredicted RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 HGSNATQ68CP4 663 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 PLEKHA7Q6IQ23 1121 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 EBNA1BP2Q99848 306 aaKnown RBP13.61□□□□□ -0.23
SIX4-201ENST00000216513 SMOC2Q9H3U7 446 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
SIX4-201ENST00000216513 TM9SF1O15321 606 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 KRT8P05787 483 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 LINC00032P0C843 101 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 KPNB1Q14974 876 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 CMC1Q7Z7K0 106 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 ZNF567Q8N184 647 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 SRFBP1Q8NEF9 429 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 OR4A15Q8NGL6 344 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 SLC22A18Q96BI1 424 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 FAM227AF5H4B4 570 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 ATP6V1G2O95670 118 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 VHLP40337 213 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 CCR3P51677 355 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 CORO7P57737 925 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 LYSMD3Q7Z3D4 306 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 IRF2BP2Q7Z5L9 587 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 TGM7Q96PF1 710 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 TCF7L2Q9NQB0 619 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 IGSF9Q9P2J2 1179 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 PRR5-ARHGAP8B1AHC4 643 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 H3BN98 237 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 DNAJB14Q8TBM8 379 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 MRPL38Q96DV4 380 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 ZSCAN5AQ9BUG6 496 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 UBE2ZQ9H832 354 aaPredicted RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 COG5Q9UP83 839 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 SNTNA6NMZ2 147 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 PLK4O00444 970 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 SLC28A2O43868 658 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 PBX2P40425 430 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 NSG1P42857 185 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 NUMBLQ9Y6R0 609 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 NCANO14594 1321 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
SIX4-201ENST00000216513 HNRNPRO43390 633 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 TPD52L2O43399 206 aaKnown RBP13.6□□□□□ -0.23
SIX4-201ENST00000216513 POP7O75817 140 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms