RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ITGB6P18564 788 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CTHP32929 405 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ELP6Q0PNE2 266 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ALYREFQ86V81 257 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 LSMEM2Q8N112 164 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SIKE1Q9BRV8 207 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZSCAN5AQ9BUG6 496 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 DYRK4Q9NR20 520 aa19.44■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FADS2P1A8MWK0 482 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 C2CD4DB7Z1M9 353 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 UBXN8O00124 270 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 BTN3A1O00481 513 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TRIM16O95361 564 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PSMD8P48556 350 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZBTB16Q05516 673 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ACOX1Q15067 660 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ERN2Q76MJ5 926 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 MAVSQ7Z434 540 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TRAM1L1Q8N609 369 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FAM13CQ8NE31 585 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FUBP1Q96AE4 644 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NMUR2Q9GZQ4 415 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RAD18Q9NS91 495 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 MBD1Q9UIS9 605 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NPEPPSL1A6NEC2 478 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SPECC1L-ADORA2AF8WAN1 911 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FCHO1O14526 889 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NPHS1O60500 1241 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TPBGLP0DKB5 382 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TNFRSF4P43489 277 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 AGR3Q8TD06 166 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PDLIM5Q96HC4 596 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NSL1Q96IY1 281 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 EBF4Q9BQW3 602 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ILKAPQ9H0C8 392 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 COLQQ9Y215 455 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RAP2CQ9Y3L5 183 aa19.43■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZNF195O14628 629 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 WNT9AO14904 365 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SMIM24O75264 130 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CCND1P24385 295 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TIE1P35590 1138 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 P2RY2P41231 377 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SEC13P55735 322 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CAMK2GQ13555 558 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CFAP157Q5JU67 520 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 COQ10AQ96MF6 247 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 HDAC8Q9BY41 377 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RNF112Q9ULX5 631 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 COQ6Q9Y2Z9 468 aa19.42■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NPC1O15118 1278 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 HNRNPCL1O60812 293 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 WFS1O76024 890 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ALOX15P16050 662 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 IMPDH1P20839 514 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 MPSTP25325 297 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 KRT72Q14CN4 511 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZNF284Q2VY69 593 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FAM91A1Q658Y4 838 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RPS27LQ71UM5 84 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CACUL1Q86Y37 369 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 AP2M1Q96CW1 435 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 L3HYPDHQ96EM0 354 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 DTD2Q96FN9 168 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CNDP1Q96KN2 507 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 GAS2L1Q99501 681 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 WWP1Q9H0M0 922 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ARMCX1Q9P291 453 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 MTX2O75431 263 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 AKT1P31749 480 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 DRD3P35462 400 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SERPINB5P36952 375 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RGS19P49795 217 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 HERVK_113P63132 956 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CNTN1Q12860 1018 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PRKAA1Q13131 559 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 KHDC1Q4VXA5 237 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CYP2U1Q7Z449 544 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RAVER1Q8IY67 606 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 NRSN1Q8IZ57 195 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZBTB2Q8N680 514 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PTGR2Q8N8N7 351 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ERVK-6Q9BXR3 956 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 CADM1Q9BY67 442 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SHCBP1LQ9BZQ2 653 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 RSPH9Q9H1X1 276 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 KCNK12Q9HB15 430 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SPATS2LQ9NUQ6 558 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZDHHC2Q9UIJ5 367 aa19.41■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SOX1O00570 391 aaPredicted RBP19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 SATB1Q01826 763 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PFKFB4Q16877 469 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 ZNF678Q5SXM1 525 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 PIP5KL1Q5T9C9 394 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 FAM46CQ5VWP2 391 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 DDHD1Q8NEL9 900 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 VPS35Q96QK1 796 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 TUBB6Q9BUF5 446 aa19.4■□□□□ 0.7
TNFRSF1A-201ENST00000162749 EBF2Q9HAK2 575 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms