RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SIRPB2Q5JXA9 342 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 CRTC3Q6UUV7 619 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 SPOCD1Q6ZMY3 1216 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 PRSS42Q7Z5A4 293 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 KATNAL2Q8IYT4 538 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 ESX1Q8N693 406 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 KLHL6Q8WZ60 621 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 MRGPRX2Q96LB1 330 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 UBP1Q9NZI7 540 aa15.6■□□□□ 0.09
ERCC1-201ENST00000013807 COL12A1Q99715 3063 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 SPTBP11277 2137 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 DOPEY2Q9Y3R5 2298 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 HACD1B0YJ81 288 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 NKX2-8O15522 239 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 SPOPO43791 374 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 MTX2O75431 263 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 ZRANB2O95218 330 aaKnown RBP eCLIP15.59■□□□□ 0.09
ERCC1-201ENST00000013807 RECKO95980 971 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 FGF5P12034 268 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 AMD1P17707 334 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 VCLP18206 1134 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 NFKB1P19838 968 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 HLA-DPA1P20036 260 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 CAPZBP47756 277 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 KCNAB2Q13303 367 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 MPP3Q13368 585 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 XRCC4Q13426 336 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 GPR18Q14330 331 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 LDLRAP1Q5SW96 308 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 B4GALNT4Q76KP1 1039 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 TRIM48Q8IWZ4 208 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 RCOR2Q8IZ40 523 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 DDHD1Q8NEL9 900 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 P3H4Q92791 437 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 SMOXQ9NWM0 555 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 KLHL3Q9UH77 587 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 TRHDEQ9UKU6 1024 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 HYOU1Q9Y4L1 999 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 LRRK2Q5S007 2527 aa15.59■□□□□ 0.09
ERCC1-201ENST00000013807 hCG_1818297A0A087WSY0 165 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 PDZK1P1A8MUH7 402 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 AKR1B15C9JRZ8 316 aaPredicted RBP15.58■□□□□ 0.08
ERCC1-201ENST00000013807 GAPDHSO14556 408 aaPredicted RBP15.58■□□□□ 0.08
ERCC1-201ENST00000013807 TYRP1P17643 537 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 RPL10P27635 214 aaKnown RBP15.58■□□□□ 0.08
ERCC1-201ENST00000013807 SPAM1P38567 509 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 MAPK9P45984 424 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 PPM1FP49593 454 aaPredicted RBP15.58■□□□□ 0.08
ERCC1-201ENST00000013807 CDC20Q12834 499 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 ITGA9Q13797 1035 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 PPP2R5EQ16537 467 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 ZNF567Q8N184 647 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 ZFPM2Q8WW38 1151 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 ZDHHC12Q96GR4 267 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 OXNAD1Q96HP4 312 aaPredicted RBP15.58■□□□□ 0.08
ERCC1-201ENST00000013807 FCRL4Q96PJ5 515 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 C19orf43Q9BQ61 176 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 BPIFA1Q9NP55 256 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 EFR3BQ9Y2G0 817 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 DNAJC16Q9Y2G8 782 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 WDR37Q9Y2I8 494 aa15.58■□□□□ 0.08
ERCC1-201ENST00000013807 KLHL33A6NCF5 533 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 OR52A4PA6NMU1 304 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 AGAP14A8MT82 685 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 NELFEP18615 380 aaKnown RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 FECHP22830 423 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 LEPRP48357 1165 aaKnown RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 DRG2P55039 364 aaKnown RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 NFKB2Q00653 900 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 PLA2G4EQ3MJ16 856 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 METRNLQ641Q3 311 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 CYB5D1Q6P9G0 228 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 BBS12Q6ZW61 710 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 PID1Q7Z2X4 250 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 AMZ2Q86W34 360 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 BPHLQ86WA6 291 aaPredicted RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 TRAPPC5Q8IUR0 188 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 RASGEF1AQ8N9B8 481 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 APOBEC4Q8WW27 367 aaKnown RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 STARD8Q92502 1023 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 RSC1A1Q92681 617 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 CXorf40BQ96DE9 158 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 ZNF514Q96K75 400 aaPredicted RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 TTC25Q96NG3 672 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 TGM7Q96PF1 710 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 QKIQ96PU8 341 aaKnown RBP eCLIP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 ZCCHC2Q9C0B9 1178 aaKnown RBP15.57■□□□□ 0.08
ERCC1-201ENST00000013807 RPS6KL1Q9Y6S9 549 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 MED13Q9UHV7 2174 aa15.57■□□□□ 0.08
ERCC1-201ENST00000013807 RP1L1Q8IWN7 2480 aaPredicted RBP15.56■□□□□ 0.08
ERCC1-201ENST00000013807 APOC4-APOC2K7ER74 178 aa15.56■□□□□ 0.08
ERCC1-201ENST00000013807 POP7O75817 140 aaKnown RBP15.56■□□□□ 0.08
ERCC1-201ENST00000013807 APOC2P02655 101 aa15.56■□□□□ 0.08
ERCC1-201ENST00000013807 SLC4A1P02730 911 aa15.56■□□□□ 0.08
ERCC1-201ENST00000013807 ZNF28P17035 718 aa15.56■□□□□ 0.08
ERCC1-201ENST00000013807 F8A1P23610 371 aa15.56■□□□□ 0.08
ERCC1-201ENST00000013807 OAS2P29728 719 aaKnown RBP15.56■□□□□ 0.08
ERCC1-201ENST00000013807 HALP42357 657 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms