RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Il23aQ9EQ14 196 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Erap1Q9EQH2 930 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Extl1Q9JKV7 669 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kcng1A2BDX4 514 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Spdye4cI6XKQ3 339 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 H2-AaP01910 256 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Npr1P18293 1057 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rab8aP55258 207 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tekt4Q149S1 447 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gsdmc2Q2KHK6 480 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 BegainQ68EF6 600 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cfap206Q6PE87 622 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr169Q7TS53 313 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fndc11Q80WB0 326 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tex13c3Q810P0 219 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem62Q8BXJ9 643 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gpat3Q8C0N2 438 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Psapl1Q8C1C1 522 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gsdmc3Q8CB12 480 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pnpla8Q8K1N1 776 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lsm14aQ8K2F8 462 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn1r205Q8R276 316 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vwa1Q8R2Z5 415 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 KmoQ91WN4 479 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc22a7Q91WU2 540 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sult5a1Q91X36 291 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sh3d19Q91X43 789 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MrgpreQ91ZB7 310 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc44a3Q921V7 656 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rnf111Q99ML9 989 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 S100a14Q9D2Q8 104 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PyglQ9ET01 850 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn1r49Q9WUF1 310 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Atad5Q4QY64 1826 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam181aJ3QNB7 292 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kif1cO35071 1100 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 JunP05627 334 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 WarsP32921 481 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pxmp2P42925 194 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smpdl3aP70158 445 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 BmxP97504 651 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 IdsQ08890 552 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp4f37Q3V1F1 546 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 RasefQ5RI75 627 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sdf4Q61112 361 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Znf280cQ6P3Y5 742 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Inppl1Q6P549 1257 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Bend6Q6PFX2 281 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr213Q7TS32 327 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Efr3aQ8BG67 819 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Stk-ps2Q8C0V7 499 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dclre1cQ8K4J0 705 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Traf3ip2Q8N7N6 555 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc29a4Q8R139 528 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nol6Q8R5K4 1152 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Adgrf1Q8VEC3 908 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1353Q8VGU8 309 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rnf167Q91XF4 347 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fars2Q99M01 451 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Det1Q9D0A0 550 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Clec2gQ9D676 269 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rgs1Q9JL25 209 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Arl10Q9QXJ4 243 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Myo7aP97479 2215 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mrgpra2aA0A0R4J1Z0 331 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klhl33G3UW92 533 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sult2b1O35400 338 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Impdh2P24547 514 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hmx2P43687 273 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TgfbiP82198 683 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Treml2Q2LA85 329 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 ThrspQ62264 150 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mon1aQ6PDG8 556 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TxlngQ8BHN1 524 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Palm2Q8BR92 376 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ttc34Q8C0Q3 554 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mtmr14Q8VEL2 648 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Isoc1Q91V64 297 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc35a5Q921R7 437 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 AasdhpptQ9CQF6 309 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Atg7Q9D906 698 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CtsrQ9JIA9 334 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Spag4Q9JJF2 443 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rnf11Q9QYK7 154 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pex11bQ9Z210 259 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PatjQ63ZW7 1834 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ttc3O88196 1979 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Krt83E9Q1Y9 479 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm20828J3KMI7 228 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Calhm3J3QMI4 347 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm6337K7N6X9 211 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm3115L7N285 211 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cyp27b1O35084 507 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 NagluO88325 739 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gria1P23818 907 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Naa11Q3UX61 218 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Brsk2Q69Z98 735 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tyw1Q8BJM7 721 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Elmo1Q8BPU7 727 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ago1Q8CJG1 857 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms