RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Slc2a7P0C6A1 513 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gria1P23818 907 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Nedd8P29595 81 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cdh6P97326 790 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 VegfdP97946 358 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pou6f1Q07916 301 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Znf367Q0VDT2 340 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Prrc1Q3UPH1 443 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Usp22Q5DU02 525 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fxr1Q61584 677 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pum1Q80U78 1189 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Psmd5Q8BJY1 504 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Proser2Q8C5R2 471 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Lgals12Q91VD1 314 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fig4Q91WF7 907 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Hhipl2Q9D2G9 717 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Obp1aQ9D3H2 163 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Xrn2Q9DBR1 951 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Tfcp2Q9ERA0 502 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Stk19Q9JHN8 254 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cyp3a41aQ9JMA7 504 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 HaspinQ9Z0R0 754 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ttc21aQ8C0S4 1314 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 A0A286YDP4 300 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Scgb1b24B1B0N6 92 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r96E9PZU5 664 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm20721E9Q2U8 318 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 TcapO70548 167 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Wnt5bP22726 359 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cdh11P55288 796 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Bop1P97452 732 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Secisbp2Q3U1C4 858 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ndst1Q3UHN9 882 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Clns1aQ61189 236 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pram1Q6BCL1 675 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Zzz3Q6KAQ7 910 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 MregQ6NVG5 214 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ugt2a2Q6PDD0 528 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dhx40Q6PE54 779 aaKnown RBP8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gpatch2Q7TQC7 527 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Tbx10Q810F8 385 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gpt2Q8BGT5 522 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fignl1Q8BPY9 683 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Lats1Q8BYR2 1129 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Slc26a6Q8CIW6 758 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Agpat4Q8K4X7 378 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gprc6aQ8K4Z6 928 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr127Q8VF25 323 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Sh2b1Q91ZM2 756 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr711Q9EPG2 314 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Acox2Q9QXD1 681 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dnajb9Q9QYI6 222 aa8.88□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm3854A0A1B0GSS6 495 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Skint8A7XV07 398 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Arhgap40E9Q6X9 672 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm12794L7MTS5 483 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Unc5cO08747 931 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 RoraP51448 523 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gng11P61953 73 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 St8sia5P70126 412 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Tcfl5Q32NY8 489 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Usp17laQ61068 526 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Adam12Q61824 903 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Herc4Q6PAV2 1057 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Parp16Q7TMM8 322 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pcdh8Q7TSK3 1070 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gpr158Q8C419 1200 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cadm4Q8R464 388 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Erlec1Q8VEH8 483 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr449Q8VGW8 311 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pla1aQ8VI78 456 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rnf31Q924T7 1066 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gbe1Q9D6Y9 702 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Lrrc69Q9D9Q0 347 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Prl8a6Q9DAY2 240 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gpr45Q9EQQ4 373 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Irs4Q9Z0Y7 1216 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r5K7N788 911 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Kng1O08677 661 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 DcxO88809 366 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cpne2P59108 548 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Kcna7Q17ST2 489 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Clec12aQ504P2 267 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Nomo1Q6GQT9 1214 aaKnown RBP8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Zfp324Q78F42 583 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr1212Q7TR08 311 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Lrtm1Q8BXQ3 356 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rbm4Q8C7Q4 361 aaKnown RBP8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cd209bQ8CJ91 325 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ace2Q8R0I0 805 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Apbb3Q8R1C9 486 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ugt2b37Q8VCN3 530 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rbm4bQ8VE92 357 aaKnown RBP8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ubap2Q91VX2 1132 aaKnown RBP8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Glra3Q91XP5 464 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 MrnipQ9D1F5 335 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Il1rl2Q9ERS7 574 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Arhgef10Q8C033 1345 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm28710A0A1B0GR31 962 aa8.87□□□□□ -0.99
Clcn3-202ENSMUST00000056508 RarbP22605 482 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms