RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Q8CC96 669 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr30Q8VGD8 315 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Rab14Q91V41 215 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Exosc4Q921I9 245 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Pard3bQ9CSB4 1203 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 CcniQ9Z2V9 377 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Olfr1049A2ARZ0 308 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Pramef25A2ASI9 494 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Krt28A6BLY7 462 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Vmn2r50E9PW61 861 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 4930579F01RikE9Q3L6 325 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm16427J3QN52 483 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm8926L7MUE8 181 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Foxd2O35392 492 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Rgs7O54829 469 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Igf2bp1O88477 577 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 TnfP06804 235 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 CtskP55097 329 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cntn3Q07409 1028 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Yy2Q3TTC2 378 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Serpina3gQ5I2A0 440 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Dnajc1Q61712 552 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Dcaf15Q6PFH3 600 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Bri3bpQ8BXV2 253 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Slco6c1Q8C0X7 706 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 LaynQ8C351 381 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Cstf2tQ8C7E9 632 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gsdmc3Q8CB12 480 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Ppa2Q91VM9 330 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Sntg1Q925E1 517 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Mrps17Q9CQE3 120 aaKnown RBP10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Slc6a19Q9D687 634 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Prorsd1Q9D820 169 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Rnf11Q9QYK7 154 aa10.59□□□□□ -0.71
Rnf40-201ENSMUST00000033088 Gm28961A0A087WPA5 222 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gm21858A0A087WQ24 222 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tbc1d25A1A5B6 742 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gm6592A2AHC7 168 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 TroapB7ZNG4 668 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 AunipE9Q6Z5 340 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gm12794L7MTS5 483 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Pcsk2P21661 637 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kcnab2P62482 367 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 OxtrP97926 388 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Eml1Q05BC3 814 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 GmpsQ3THK7 693 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Laptm4aQ60961 233 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Znf185Q62394 352 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Bnc2Q8BMQ3 1127 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kyat1Q8BTY1 424 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Aph1bQ8C7N7 257 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Fate1Q8CEK7 99 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Lrrc66Q8K0B3 872 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Prkd3Q8K1Y2 889 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Elovl6Q920L5 267 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Atp13a2Q9CTG6 1169 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ndufs3Q9DCT2 263 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Nek6Q9ES70 313 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rad18Q9QXK2 509 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Smok1Q9QYZ4 484 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Bloc1s6Q9R0C0 172 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Plod3Q9R0E1 741 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mrgpra2aA0A0R4J1Z0 331 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 TagapB2RWW0 714 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gm17174M0QWQ9 212 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Polr2jO08740 117 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Cyp2c38P56655 490 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 PrkcgP63318 697 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ddx4Q61496 702 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Plppr4Q7TME0 766 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gadl1Q80WP8 550 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Zmym6Q8BS54 1249 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Q8R2K8 148 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Adgre4Q91ZE5 689 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ndfip2Q91ZP6 311 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Reep3Q99KK1 254 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mrps5Q99N87 432 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Q9DAY5 185 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Prl2a1Q9JHK0 228 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tnfsf13bQ9WU72 309 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Olfr414E9Q5P8 317 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tex16F6WNY1 1150 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Anxa3O35639 323 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Stx7O70439 261 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tp63O88898 680 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Got2P05202 430 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 H2-Q8P14430 326 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Anxa5P48036 319 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kcnj6P48542 425 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ranbp9P69566 653 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 H2-Q6P79568 326 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tmem63bQ3TWI9 832 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Trafd1Q3UDK1 580 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Lrrc58Q3UGP9 366 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Macrod2Q3UYG8 475 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Magee1Q6PCZ4 918 aaKnown RBP10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Svs1Q6WIZ7 820 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Cgrrf1Q8BMJ7 332 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Fam163bQ8BUM6 167 aa10.58□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn1r24Q8R2D6 296 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms