RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DUSP15Q9H1R2 295 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 P2RY12Q9H244 342 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 PCDHB1Q9Y5F3 818 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 HS3ST3A1Q9Y663 406 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 PRSS21Q9Y6M0 314 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 A6NNZ2 444 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 E5RI56 91 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 CDK14O94921 469 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 SP9P0CG40 484 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 DHPSP49366 369 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 THOP1P52888 689 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ADARP55265 1226 aaKnown RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 CTSL3PQ5NE16 218 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 HECTD2Q5U5R9 776 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 Q6ZSR6 202 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ADGRG6Q86SQ4 1221 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 RASGEF1AQ8N9B8 481 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 MTBPQ96DY7 904 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 GPR22Q99680 433 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 AARSD1Q9BTE6 412 aaKnown RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 CAB39LQ9H9S4 337 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ZSCAN32Q9NX65 697 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 EURLQ9NYK6 297 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ATXN10Q9UBB4 475 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 LGALS13Q9UHV8 139 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 MOSPD1Q9UJG1 213 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 CORO1CQ9ULV4 474 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 HMX2A2RU54 273 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 IQCF5A8MTL0 148 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 FOXO6A8MYZ6 492 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 HRO43593 1189 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 RHOBTB1O94844 696 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 TRIM16O95361 564 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 OR56A5P0C7T3 313 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ITGB6P18564 788 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 CHRM3P20309 590 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 RPS3P23396 243 aaKnown RBP eCLIP17.26■□□□□ 0.354e-8■■■■■ 27.6
PHGDH-230ENST00000641927 HTR1BP28222 390 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 POLD2P49005 469 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ILF2Q12905 390 aaKnown RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ZNF528Q3MIS6 628 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 WDR45BQ5MNZ6 344 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 FAM45BPQ6NSW5 357 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 FAM45AQ8TCE6 357 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ORAI3Q9BRQ5 295 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 SARS2Q9NP81 518 aaKnown RBP17.26■□□□□ 0.35
PHGDH-230ENST00000641927 VWA7Q9Y334 891 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
PHGDH-230ENST00000641927 ABCA7Q8IZY2 2146 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 TPP1O14773 563 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 VEGFDO43915 354 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 NIPSNAP2O75323 286 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 MT-ND3P03897 115 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 RABIFP47224 123 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 SERPINB8P50452 374 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 PFN3P60673 137 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 KYAT3Q6YP21 454 aaKnown RBP17.25■□□□□ 0.35
PHGDH-230ENST00000641927 MACC1Q6ZN28 852 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 RAPH1Q70E73 1250 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 CMC1Q7Z7K0 106 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 TRAPPC5Q8IUR0 188 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 OR13H1Q8NG92 308 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 PGM2Q96G03 612 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-230ENST00000641927 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 COMMD10Q9Y6G5 202 aa17.25■□□□□ 0.35
PHGDH-230ENST00000641927 TMEM202A6NGA9 273 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 F8W8V4 182 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 H3BMM5 538 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 VPS26AO75436 327 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 AP2A2O94973 939 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 STMN1P16949 149 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 ZNF8P17098 575 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-230ENST00000641927 KELP23276 732 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 TYK2P29597 1187 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 ATP5DP30049 168 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 CNR2P34972 360 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 PGGT1BP53609 377 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 CTSCP53634 463 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 CDKN2DP55273 166 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 TAS2R39P59534 338 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 KIAA1024LP59773 190 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 YPEL5P62699 121 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 POU4F1Q01851 419 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 NFATC4Q14934 902 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 LYSMD4Q5XG99 296 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 TMEM220Q6QAJ8 160 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 CRTC3Q6UUV7 619 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 ENPP7Q6UWV6 458 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 BEND7Q8N7W2 519 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-230ENST00000641927 OLFM1Q99784 485 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 TAS2R13Q9NYV9 303 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 CEP192Q8TEP8 1941 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 KMT2EQ8IZD2 1858 aa17.24■□□□□ 0.35
PHGDH-230ENST00000641927 A0A1W2PPM1 405 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 GOLGA8RI6L899 631 aa17.23■□□□□ 0.35
PHGDH-230ENST00000641927 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-230ENST00000641927 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms