RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CYGBQ8WWM9 190 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 DUS3LQ96G46 650 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 PPM1MQ96MI6 270 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 AIG1Q9NVV5 245 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 DMTF1Q9Y222 760 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 MYRFQ9Y2G1 1151 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 A0A1W2PP18 115 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 FOXD2O60548 495 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 NBNO60934 754 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 PKMP14618 531 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 IDO1P14902 403 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 MZF1P28698 734 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 CORO1AP31146 461 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 MTPNP58546 118 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 RING1Q06587 406 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 RCAN2Q14206 197 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 CLDN19Q8N6F1 224 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 PROKR1Q8TCW9 393 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 HOPXQ9BPY8 73 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 BOCQ9BWV1 1114 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ANKRD60Q9BZ19 345 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ZMYM5Q9UJ78 669 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 C5orf42Q9H799 3197 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 BBIP1A8MTZ0 92 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ANKRD66B4E2M5 251 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ACOX3O15254 700 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 HNRNPRO43390 633 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 MATN4O95460 622 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 STAMBPO95630 424 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ESRRBO95718 433 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 GUCA1CO95843 209 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 F11P03951 625 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 SLC10A3P09131 477 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 PSMA4P25789 261 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 GDF5P43026 501 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 KCNK10P57789 538 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 TAF1AQ15573 450 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 C6orf136Q5SQH8 315 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 ALG1LQ6GMV1 187 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 NANOGP8Q6NSW7 305 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 CASD1Q96PB1 797 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 INTS10Q9NVR2 710 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 TRMT6Q9UJA5 497 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 FCF1Q9Y324 198 aaKnown RBP16.65■□□□□ 0.26
PHGDH-223ENST00000641597 PCDHB9Q9Y5E1 797 aa16.65■□□□□ 0.26
PHGDH-223ENST00000641597 CDH23Q9H251 3354 aa16.64■□□□□ 0.26
PHGDH-223ENST00000641597 C2orf81A6NN90 581 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 SLC22A3O75751 556 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 RHOCP08134 193 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PRR35P0CG20 571 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PCNAP12004 261 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 HSD17B1P14061 328 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PLCL1Q15111 1095 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 XKR7Q5GH72 579 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 GPSM1Q86YR5 675 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 SFRP1Q8N474 314 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 MYRFLQ96LU7 910 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 KCTD14Q9BQ13 255 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ADI1Q9BV57 179 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 TM6SF2Q9BZW4 377 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 MAGEH1Q9H213 219 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 LTB4R2Q9NPC1 389 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ACTR3BQ9P1U1 418 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 DNMT3LQ9UJW3 386 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 KDELR3O43731 214 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 SYNCRIPO60506 623 aaKnown RBP16.64■□□□□ 0.25
PHGDH-223ENST00000641597 SNX2O60749 519 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ALDH2P05091 517 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 CAPN1P07384 714 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 LPOP22079 712 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-223ENST00000641597 HRH2P25021 359 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 CCT8P50990 548 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 MAP7Q14244 749 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 TGFBIQ15582 683 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 LCN8Q6JVE9 175 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 GPRIN3Q6ZVF9 776 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 LKAAEAR1Q8TD35 194 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 MAGEE2Q8TD90 523 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ABCG8Q9H221 673 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ACTL8Q9H568 366 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 POPDC3Q9HBV1 291 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 TLR9Q9NR96 1032 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PNPLA3Q9NST1 481 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 ETAA1Q9NY74 926 aa16.64■□□□□ 0.25
PHGDH-223ENST00000641597 PLXNA4Q9HCM2 1894 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 TCRBV5S2A0A599 114 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 E5RI56 91 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 STX7O15400 261 aaKnown RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 STC2O76061 302 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 SNAP29O95721 258 aa16.63■□□□□ 0.25
PHGDH-223ENST00000641597 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-223ENST00000641597 G6PDP11413 515 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms