RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TRAF6Q9Y4K3 522 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 PRSS21Q9Y6M0 314 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 ZNF106Q9H2Y7 1883 aaKnown RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 C16orf96A6NNT2 1141 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 B2RBV5 119 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 DCXO43602 365 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 KLK8O60259 260 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 SNX2O60749 519 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 CRY1Q16526 586 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 GAB4Q2WGN9 574 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 NXNQ6DKJ4 435 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 SYCE2Q6PIF2 218 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 CPA6Q8N4T0 437 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 ST13P5Q8NFI4 369 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 UTP4Q969X6 686 aaKnown RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 NXPE3Q969Y0 559 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 MAELQ96JY0 434 aaKnown RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 PANX3Q96QZ0 392 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 GDF15Q99988 308 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 RAD18Q9NS91 495 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 SPATS2LQ9NUQ6 558 aaKnown RBP17.09■□□□□ 0.33
PHGDH-208ENST00000641023 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
PHGDH-208ENST00000641023 GSC2O15499 205 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 PRNPP04156 253 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 CPA2P48052 419 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 CDH13P55290 713 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 SATB1Q01826 763 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 FCHO2Q0JRZ9 810 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 HYAL1Q12794 435 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 RIPK1Q13546 671 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 FNDC3BQ53EP0 1204 aaKnown RBP17.08■□□□□ 0.33
PHGDH-208ENST00000641023 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 ERAP2Q6P179 960 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 VITQ6UXI7 678 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 RINLQ6ZS11 566 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 ADAMTSL2Q86TH1 951 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 PACS2Q86VP3 889 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 YAF2Q8IY57 180 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 CLYBLQ8N0X4 340 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 MYO1HQ8N1T3 1032 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 CEP70Q8NHQ1 597 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 SPATA16Q9BXB7 569 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 HPS4Q9NQG7 708 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 CD84Q9UIB8 345 aa17.08■□□□□ 0.33
PHGDH-208ENST00000641023 NCF1BA6NI72 391 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 NCF1CA8MVU1 366 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 UBFD1O14562 309 aaKnown RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 LINC01565O15544 149 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 JUNP05412 331 aaKnown RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 NCF1P14598 390 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 ITGB6P18564 788 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 EEF1DP29692 281 aaKnown RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 MESP2Q0VG99 397 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 TGFBIQ15582 683 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 HNRNPA1L2Q32P51 320 aaKnown RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 FRA10AC1Q70Z53 315 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 DTX3LQ8TDB6 740 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 MCUR1Q96AQ8 359 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 MIPEPQ99797 713 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 CADM1Q9BY67 442 aaKnown RBP17.08■□□□□ 0.32
PHGDH-208ENST00000641023 C1orf21Q9H246 121 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 CD274Q9NZQ7 290 aa17.08■□□□□ 0.32
PHGDH-208ENST00000641023 EDDM13A0A1B0GTR0 161 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-208ENST00000641023 MAGEC1O60732 1142 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 FGF4P08620 206 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 OR56A5P0C7T3 313 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 TSPAN8P19075 237 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 DCDC1P59894 354 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 CLCQ05315 142 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 RUNX3Q13761 415 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 GPRC6AQ5T6X5 926 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 ARHGAP24Q8N264 748 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 UCMAQ8WVF2 138 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 C1QTNF3Q9BXJ4 246 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 LATS2Q9NRM7 1088 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 MRGBPQ9NV56 204 aa17.07■□□□□ 0.32
PHGDH-208ENST00000641023 IGLV3-16A0A075B6K0 115 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 RGSL1A5PLK6 1076 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 SKAP2O75563 359 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-208ENST00000641023 ADSLP30566 484 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-208ENST00000641023 COPAP53621 1224 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 SH3BP2P78314 561 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 MXRA7P84157 204 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 BTKQ06187 659 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 LCP2Q13094 533 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 CES5AQ6NT32 575 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 DPPA4Q7L190 304 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 HSD11B1LQ7Z5J1 315 aa17.06■□□□□ 0.32
PHGDH-208ENST00000641023 SUGP1Q8IWZ8 645 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms