RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 PSME3P61289 254 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SUSD1Q6UWL2 747 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SH2D5Q6ZV89 423 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 OR6Y1Q8NGX8 325 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 TUBB6Q9BUF5 446 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SYTL2Q9HCH5 934 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SH3BP4Q9P0V3 963 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 NINQ8N4C6 2090 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 MMP2P08253 660 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 MAP4P27816 1152 aaKnown RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PPARGP37231 505 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 RGS4P49798 205 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 MESP2Q0VG99 397 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 TRAF7Q6Q0C0 670 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 C2CD4AQ8NCU7 369 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 ITFG1Q8TB96 612 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PCDH12Q9NPG4 1184 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 TMEM98Q9Y2Y6 226 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 ZNF711Q9Y462 761 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 NPIPB15A6NHN6 443 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 KPNA1P52294 538 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 IRF5Q13568 498 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 GTF2H3Q13889 308 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 ATP13A5Q4VNC0 1218 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 RAET1GQ6H3X3 334 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 GCNT7Q6ZNI0 430 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 HMGN2P46Q86SG4 172 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 APOLD1Q96LR9 279 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 RNF145Q96MT1 663 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 TSGA13Q96PP4 275 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 TDP1Q9NUW8 608 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 B4GALT6Q9UBX8 382 aa12.12□□□□□ -0.47
PRICKLE1-215ENST00000640055 SLC31A1O15431 190 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 UFM1P61960 85 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 PHKG1Q16816 387 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 C6orf52Q5T4I8 152 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 FAM45AQ8TCE6 357 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 LKAAEAR1Q8TD35 194 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 STYXQ8WUJ0 223 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 PGAP3Q96FM1 320 aaPredicted RBP12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 MATN2O00339 956 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 WDR47O94967 919 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 B3GALT4O96024 378 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ZNF37AP17032 561 aaPredicted RBP12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 RFX3P48380 749 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ALDH9A1P49189 494 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 STC1P52823 247 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 GRIN2CQ14957 1233 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ATP6AP1LQ52LC2 224 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 IER5LQ5T953 404 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 CNKSR3Q6P9H4 555 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 PLD3Q8IV08 490 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 FRMD1Q8N878 549 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 COPS8Q99627 209 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 PKMYT1Q99640 499 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 DRC3Q9H069 523 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 ELOVL6Q9H5J4 265 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 COL6A3P12111 3177 aa12.11□□□□□ -0.47
PRICKLE1-215ENST00000640055 GNG14A0A1W2PPG7 69 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 TRPC5OSA6NMA1 111 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 AP3B1O00203 1094 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 GRID2O43424 1007 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 LEFTY1O75610 366 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 CDK14O94921 469 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 CA5AP35218 305 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 AQP4P55087 323 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 MS4A2Q01362 244 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 ARHGAP15Q53QZ3 475 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 PHC3Q8NDX5 983 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 SELENOMQ8WWX9 145 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 RIOK2Q9BVS4 552 aaKnown RBP12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 ARMC7Q9H6L4 198 aa12.1□□□□□ -0.47
PRICKLE1-215ENST00000640055 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms