RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MMEL1Q495T6 779 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 ZRANB3Q5FWF4 1079 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 AARS2Q5JTZ9 985 aaKnown RBP14.95□□□□□ -0.02
TRIM3-215ENST00000639856 C22orf39Q6P5X5 142 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 LYSMD3Q7Z3D4 306 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 ZSWIM9Q86XI8 627 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 RNF148Q8N7C7 305 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 OR2AP1Q8NGE2 309 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 FUBP1Q96AE4 644 aaKnown RBP14.95□□□□□ -0.02
TRIM3-215ENST00000639856 SLC30A3Q99726 388 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 APOL5Q9BWW9 433 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 KLHL4Q9C0H6 718 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 FBRSL1Q9HCM7 1045 aaKnown RBP14.95□□□□□ -0.02
TRIM3-215ENST00000639856 CACNA2D2Q9NY47 1150 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 GALPQ9UBC7 116 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 SLCO3A1Q9UIG8 710 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 HS3ST2Q9Y278 367 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 ZNF711Q9Y462 761 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 PCDHGA7Q9Y5G6 932 aa14.95□□□□□ -0.02
TRIM3-215ENST00000639856 SOBPA7XYQ1 873 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 CDC7O00311 574 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 FBP2O00757 339 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 OR1I1O60431 355 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 NIPSNAP2O75323 286 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 ECI2O75521 394 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 IGSF6O95976 241 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 EEF1DP29692 281 aaKnown RBP14.94□□□□□ -0.02
TRIM3-215ENST00000639856 MSX2P35548 267 aaPredicted RBP14.94□□□□□ -0.02
TRIM3-215ENST00000639856 PSMD8P48556 350 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 ADARP55265 1226 aaKnown RBP14.94□□□□□ -0.02
TRIM3-215ENST00000639856 CLCQ05315 142 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 BCL2L1Q07817 233 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 DUSP6Q16828 381 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 LRRC36Q1X8D7 754 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 TCEAL5Q5H9L2 206 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 CTSL3PQ5NE16 218 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 KANK2Q63ZY3 851 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 LPCAT4Q643R3 524 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 TMEM215Q68D42 235 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 REP15Q6BDI9 236 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 ZFP1Q6P2D0 407 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 ADIPOR2Q86V24 386 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 PDSS2Q86YH6 399 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 TRPC4APQ8TEL6 797 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 TWIST2Q8WVJ9 160 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 SLC25A23Q9BV35 468 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 AKTIPQ9H8T0 292 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 IL17CQ9P0M4 197 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 C6orf203Q9P0P8 240 aaPredicted RBP14.94□□□□□ -0.02
TRIM3-215ENST00000639856 DPP7Q9UHL4 492 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 SARDHQ9UL12 918 aa14.94□□□□□ -0.02
TRIM3-215ENST00000639856 TRIM38O00635 465 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 BCAS2O75934 225 aaPredicted RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 TSPAN12O95859 305 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 POU2F2P09086 479 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 ALDOCP09972 364 aaKnown RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PEX2P28328 305 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 WEE1P30291 646 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 FOXA1P55317 472 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 STX1BP61266 288 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PSME3P61289 254 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 XIAPP98170 497 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 LCP2Q13094 533 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 ANKS6Q68DC2 871 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 TMEM154Q6P9G4 183 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PQLC1Q8N2U9 271 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 SORCS1Q8WY21 1168 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 KCNJ9Q92806 393 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 GATA6Q92908 595 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 NR1H4Q96RI1 486 aaPredicted RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 MAGEE1Q9HCI5 957 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 TRMT6Q9UJA5 497 aaKnown RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PKP3Q9Y446 797 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 COMMD10Q9Y6G5 202 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 SCN8AQ9UQD0 1980 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 NPEPPSL1A6NEC2 478 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 RFXAPO00287 272 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 BTN3A1O00481 513 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 STX16O14662 325 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 ACOT8O14734 319 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PIP5K1BO14986 540 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 KLK8O60259 260 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 RPS17P08708 135 aaKnown RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PTGER3P43115 390 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 CSNK1DP48730 415 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 IL2P60568 153 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 NAA20P61599 178 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 SEMG2Q02383 582 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 TRIP10Q15642 601 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PPP2R2DQ66LE6 453 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 ELMSAN1Q6PJG2 1045 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PCDH20Q8N6Y1 951 aaKnown RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PAF1Q8N7H5 531 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 SIDT2Q8NBJ9 832 aaKnown RBP14.93□□□□□ -0.02
TRIM3-215ENST00000639856 CD200R1Q8TD46 325 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 DLG3Q92796 817 aa14.93□□□□□ -0.02
TRIM3-215ENST00000639856 PPP2R3CQ969Q6 453 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms