RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 WASHC5Q12768 1159 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 MPP3Q13368 585 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 SEPT7Q16181 437 aaKnown RBP17.68■□□□□ 0.42
PNKP-225ENST00000636214 SDK2Q58EX2 2172 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 ITPRIPL1Q6GPH6 555 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 PCSK4Q6UW60 755 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 PLXDC1Q8IUK5 500 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 IPMKQ8NFU5 416 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 BRSK1Q8TDC3 778 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 BLOC1S5Q8TDH9 187 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 VPS35Q96QK1 796 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 FCRL5Q96RD9 977 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 KLHL3Q9UH77 587 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 PKP3Q9Y446 797 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 SPO11Q9Y5K1 396 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 LILRA5A6NI73 299 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 B4E171 279 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.67■□□□□ 0.42
PNKP-225ENST00000636214 APOC4-APOC2K7ER74 178 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 CHUKO15111 745 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 APOC2P02655 101 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 AMD1P17707 334 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 IDSP22304 550 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 CD68P34810 354 aaPredicted RBP17.67■□□□□ 0.42
PNKP-225ENST00000636214 TSPAN7P41732 249 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 COPS2P61201 443 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 ZNF567Q8N184 647 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 JPH3Q8WXH2 748 aaPredicted RBP17.67■□□□□ 0.42
PNKP-225ENST00000636214 MED8Q96G25 268 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 HEMGNQ9BXL5 484 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 B3GALT1Q9Y5Z6 326 aa17.67■□□□□ 0.42
PNKP-225ENST00000636214 CFAP46Q8IYW2 2715 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 LOC285095A0A1B0GVY8 99 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 A6NCN8 305 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 AURKAO14965 403 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 PPFIA2O75334 1257 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 ANXA9O76027 345 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 PTMAP06454 111 aaKnown RBP17.66■□□□□ 0.42
PNKP-225ENST00000636214 MARCKSL1P49006 195 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 GEMP55040 296 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 XRCC4Q13426 336 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 SLC1A5Q15758 541 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 SIRPB2Q5JXA9 342 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 LDLRAP1Q5SW96 308 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 KDELC1Q6UW63 502 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 CEACAM20Q6UY09 585 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 DTX1Q86Y01 620 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 TMTC1Q8IUR5 882 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 CDKL3Q8IVW4 592 aaPredicted RBP17.66■□□□□ 0.42
PNKP-225ENST00000636214 LRRC45Q96CN5 670 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 CXorf40BQ96DE9 158 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 ZPBPQ9BS86 351 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 OCIAD1Q9NX40 245 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 PCDHGA4Q9Y5G9 962 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 ADGRG1Q9Y653 693 aa17.66■□□□□ 0.42
PNKP-225ENST00000636214 GLYATL1P3A0A0U1RQE8 302 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 NDUFA10O95299 355 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 ITGB2P05107 769 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 XRCC1P18887 633 aaPredicted RBP17.65■□□□□ 0.42
PNKP-225ENST00000636214 HALP42357 657 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 UBE2IP63279 158 aaKnown RBP17.65■□□□□ 0.42
PNKP-225ENST00000636214 ADCY2Q08462 1091 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 TMEM115Q12893 351 aaPredicted RBP17.65■□□□□ 0.42
PNKP-225ENST00000636214 SRSF6Q13247 344 aaKnown RBP17.65■□□□□ 0.42
PNKP-225ENST00000636214 PRPSAP1Q14558 356 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 NOMO1Q15155 1222 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 XKR5Q6UX68 686 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 FAM151BQ6UXP7 276 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 TMEM26Q6ZUK4 368 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 CACNA2D3Q8IZS8 1091 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 KRT35Q92764 455 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 KIAA1143Q96AT1 154 aaPredicted RBP17.65■□□□□ 0.42
PNKP-225ENST00000636214 MRGPRX2Q96LB1 330 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 TBC1D10AQ9BXI6 508 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 UCK1Q9HA47 277 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 POT1Q9NUX5 634 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 PDP2Q9P2J9 529 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 TFR2Q9UP52 801 aa17.65■□□□□ 0.42
PNKP-225ENST00000636214 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 SOWAHDA6NJG2 315 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 STX7O15400 261 aaKnown RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 KCNJ13O60928 360 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 ZNF189O75820 626 aaPredicted RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 UBXN7O94888 489 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 RPL10P27635 214 aaKnown RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 CTNNA1P35221 906 aaKnown RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 CHRNA4P43681 627 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 ARHGAP22Q7Z5H3 698 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 RBM12BQ8IXT5 1001 aaKnown RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 OXNAD1Q96HP4 312 aaPredicted RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 MRFAP1L1Q96HT8 127 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 FICDQ9BVA6 458 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 GBA3Q9H227 469 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 TRIM10Q9UDY6 481 aa17.64■□□□□ 0.41
PNKP-225ENST00000636214 SLC23A2Q9UGH3 650 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms