RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ADGRG1Q9Y653 693 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 EEF2KO00418 725 aaKnown RBP17.81■□□□□ 0.44
CLN6-212ENST00000636020 BIN1O00499 593 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 PEX11BO96011 259 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 KLK3P07288 261 aaPredicted RBP17.81■□□□□ 0.44
CLN6-212ENST00000636020 PDHA1P08559 390 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 CHRNB2P17787 502 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 CA5AP35218 305 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 ZNF235Q14590 738 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 KYNUQ16719 465 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 PLEKHS1Q5SXH7 462 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 ZNF677Q86XU0 584 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 LRFN5Q96NI6 719 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 MGME1Q9BQP7 344 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 MLPHQ9BV36 600 aaPredicted RBP17.81■□□□□ 0.44
CLN6-212ENST00000636020 SLC40A1Q9NP59 571 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 POT1Q9NUX5 634 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 MYO7BQ6PIF6 2116 aa17.81■□□□□ 0.44
CLN6-212ENST00000636020 FBN3Q75N90 2809 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 A0A1B0GUH1 482 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 SIGLEC16A6NMB1 481 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 FADS2P1A8MWK0 482 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 MEN1O00255 615 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 DIAPH2O60879 1101 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 CAPN1P07384 714 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 STSP08842 583 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 ERCC2P18074 760 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 GSDMDP57764 484 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 FMO1Q01740 532 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 GPR18Q14330 331 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 MYBPC3Q14896 1274 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 LLGL1Q15334 1064 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 ANO6Q4KMQ2 910 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 RALGPS1Q5JS13 557 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 MIIPQ5JXC2 388 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 KLHDC7AQ5VTJ3 777 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 TMEM126BQ8IUX1 230 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 RBM12BQ8IXT5 1001 aaKnown RBP17.8■□□□□ 0.44
CLN6-212ENST00000636020 C3orf20Q8ND61 904 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 ZNF552Q9H707 407 aaPredicted RBP17.8■□□□□ 0.44
CLN6-212ENST00000636020 FAM207AQ9NSI2 230 aaPredicted RBP17.8■□□□□ 0.44
CLN6-212ENST00000636020 ATXN10Q9UBB4 475 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 SLC23A2Q9UGH3 650 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 SPTBP11277 2137 aa17.8■□□□□ 0.44
CLN6-212ENST00000636020 FZD6O60353 706 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ALPPP05187 535 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 EDN3P14138 238 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 BRAFP15056 766 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ZNF8P17098 575 aaPredicted RBP17.79■□□□□ 0.44
CLN6-212ENST00000636020 MTIF2P46199 727 aaKnown RBP17.79■□□□□ 0.44
CLN6-212ENST00000636020 MAXP61244 160 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 TUBB4BP68371 445 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 CDR2Q01850 454 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 TUBB2AQ13885 445 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 CA9Q16790 459 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 HGSNATQ68CP4 663 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ABRAXAS1Q6UWZ7 409 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 FJX1Q86VR8 437 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 KMT5CQ86Y97 462 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 RAVER1Q8IY67 606 aaKnown RBP17.79■□□□□ 0.44
CLN6-212ENST00000636020 DSELQ8IZU8 1212 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 NDUFAF2Q8N183 169 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 D2HGDHQ8N465 521 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ZADH2Q8N4Q0 377 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 PCMTD1Q96MG8 357 aaPredicted RBP17.79■□□□□ 0.44
CLN6-212ENST00000636020 MAP3K3Q99759 626 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 CNPY3Q9BT09 278 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 TUBB2BQ9BVA1 445 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 KCND1Q9NSA2 647 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ADAM22Q9P0K1 906 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 ATP6V1DQ9Y5K8 247 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 FER1L5A0AVI2 2057 aa17.79■□□□□ 0.44
CLN6-212ENST00000636020 A0A0J9YYE9 177 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 TCRBV5S1A1TA0A578 114 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 PDZK1P1A8MUH7 402 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 F8VZ95 297 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 DAPK3O43293 454 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 TRBC1P01850 177 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 UNGP13051 313 aaPredicted RBP17.78■□□□□ 0.44
CLN6-212ENST00000636020 HENMT1Q5T8I9 393 aaKnown RBP17.78■□□□□ 0.44
CLN6-212ENST00000636020 RFX8Q6ZV50 586 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 OR8K5Q8NH50 307 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 ZNF501Q96CX3 271 aaPredicted RBP17.78■□□□□ 0.44
CLN6-212ENST00000636020 TRIM8Q9BZR9 551 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 VPS16Q9H269 839 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 LATS2Q9NRM7 1088 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 AP4E1Q9UPM8 1137 aa17.78■□□□□ 0.44
CLN6-212ENST00000636020 OR52A4PA6NMU1 304 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 EIF3CLB5ME19 914 aaKnown RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 KLHL41O60662 606 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 CLDN7O95471 211 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 SNRPB2P08579 225 aaKnown RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 UCHL3P15374 230 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 RORAP35398 523 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 ARL4DP49703 201 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 RPL7AP62424 266 aaKnown RBP17.77■□□□□ 0.44
CLN6-212ENST00000636020 HSD11B2P80365 405 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 GPR19Q15760 415 aa17.77■□□□□ 0.44
CLN6-212ENST00000636020 SEPT7Q16181 437 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms