RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 SMIM11AP58511 58 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 C6orf52Q5T4I8 152 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 GALNT13Q8IUC8 556 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 FBXW8Q8N3Y1 598 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 PRDM8Q9NQV8 689 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 POU2F3Q9UKI9 436 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 UGT2B4P06133 528 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 ADH1AP07327 375 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 RPS12P25398 132 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 TNFSF9P41273 254 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 SP2Q02086 613 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 ELOAQ14241 798 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 GANABQ14697 944 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 NUP54Q7Z3B4 507 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 CEP97Q8IW35 865 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 PCDH19Q8TAB3 1148 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 MEAF6Q9HAF1 191 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 EVLQ9UI08 416 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 ACTL7BQ9Y614 415 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 LAMC1P11047 1609 aa17.3■□□□□ 0.36
CACNA1A-215ENST00000635727 CPNE3O75131 537 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 TPPPO94811 219 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 RGS8P57771 180 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 MLIPQ5VWP3 458 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 METTL27Q8N6F8 245 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 TCEANCQ8N8B7 351 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 MINDY2Q8NBR6 621 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 BTBD19C9JJ37 291 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 SLC26A4O43511 780 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 RBM18Q96H35 190 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 APOLD1Q96LR9 279 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 IL12RB2Q99665 862 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 KCNQ5Q9NR82 932 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 BAIAP2Q9UQB8 552 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ZNF726A6NNF4 738 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 PDPK1O15530 556 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 OR1D2P34982 312 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 FAM13CQ8NE31 585 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 PSMG1O95456 288 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 NADKO95544 446 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 PSKH1P11801 424 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ENTPD1P49961 510 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 PLA2G16P53816 162 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ZFP69Q49AA0 526 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 ALG10Q5BKT4 473 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 CFAP20Q9Y6A4 193 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 E7ENX8 843 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 NDUFA9Q16795 377 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 SPDYCQ5MJ68 293 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 OR2L2Q8NH16 312 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 MGME1Q9BQP7 344 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 GDAP2Q9NXN4 497 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 CLEC3AO75596 197 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 RAB10P61026 200 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 FOLH1Q04609 750 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 E2F2Q14209 437 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 TBC1D21Q8IYX1 336 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 NLGN4XQ8N0W4 816 aa17.29■□□□□ 0.36
CACNA1A-215ENST00000635727 PDE2AO00408 941 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 ACVR2AP27037 513 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 GALNT18Q6P9A2 607 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MOB2Q70IA6 237 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MCFD2Q8NI22 146 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 RPL10LQ96L21 214 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 USB1Q9BQ65 265 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 NR2F6P10588 404 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 COL6A1P12109 1028 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 CFL1P23528 166 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 TKTP29401 623 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 ZNF782Q6ZMW2 699 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 ZNF184Q99676 751 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 SP140LQ9H930 580 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 TESMINQ9Y4I5 508 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 KCNE2Q9Y6J6 123 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MANSC4A6NHS7 340 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 ITGA5P08648 1049 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 RCAN1P53805 252 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 CDH11P55287 796 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 PSME3P61289 254 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 ADAM17P78536 824 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 LIPEQ05469 1076 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 NYAP1Q6ZVC0 841 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 PPP3R2Q96LZ3 170 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 TRNAU1APQ9NX07 287 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 GSKIPQ9P0R6 139 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MAU2Q9Y6X3 613 aa17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MT-CYBP00156 380 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-215ENST00000635727 MLLT3P42568 568 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms