RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SCPEP1Q9HB40 452 aa3.13□□□□□ -1.91
SRP54-214ENST00000630962 EPB41L5Q9HCM4 733 aa3.13□□□□□ -1.91
SRP54-214ENST00000630962 GAGE2DQ9UEU5 116 aa3.13□□□□□ -1.91
SRP54-214ENST00000630962 CNOT8Q9UFF9 292 aaKnown RBP3.13□□□□□ -1.91
SRP54-214ENST00000630962 DBNLQ9UJU6 430 aaKnown RBP3.13□□□□□ -1.91
SRP54-214ENST00000630962 YIPF1Q9Y548 306 aa3.13□□□□□ -1.91
SRP54-214ENST00000630962 PRAG1Q86YV5 1406 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 A0A1W2PP11 408 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ATP2A1O14983 1001 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 PAK4O96013 591 aaPredicted RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 AMBPP02760 352 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 PLA2G4BP0C869 781 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 FGF5P12034 268 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 NFKBIAP25963 317 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 HOXA13P31271 388 aaPredicted RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 ARL3P36405 182 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 DCTP40126 519 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 NR0B1P51843 470 aaKnown RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 RPS3AP61247 264 aaKnown RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 COG7P83436 770 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 DUOXA1Q1HG43 343 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ZSCAN23Q3MJ62 389 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ZNF876PQ49A33 203 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 STXBP5Q5T5C0 1151 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 JAKMIP3Q5VZ66 844 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ZDHHC20Q5W0Z9 365 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 TSPAN33Q86UF1 283 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 CCDC190Q86UF4 302 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 TEX11Q8IYF3 940 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 CNTROBQ8N137 903 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ADSSL1Q8N142 457 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 CIARTQ8N365 385 aaPredicted RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 STPG4Q8N801 248 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ACVR1CQ8NER5 493 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ASCL2Q99929 193 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 SH2D4AQ9H788 454 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 ECHDC1Q9NTX5 307 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 C2orf42Q9NWW7 574 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 TRMT1Q9NXH9 659 aaKnown RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 ZNF624Q9P2J8 865 aaPredicted RBP3.12□□□□□ -1.91
SRP54-214ENST00000630962 PADI3Q9ULW8 664 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 CLIC4Q9Y696 253 aa3.12□□□□□ -1.91
SRP54-214ENST00000630962 WDR81Q562E7 1941 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 FAM237BA0A1B0GVD1 139 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 A0A1W2PQF6 199 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 C1orf226A1L170 272 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 F5H0A9 414 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 PSMD14O00487 310 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 MLYCDO95822 493 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 SCGB1D1O95968 90 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 APOHP02749 345 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 TFAP2AP05549 437 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 CFC1P0CG37 223 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 MVPQ14764 893 aaKnown RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 CRYMQ14894 314 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 HIST2H2BCQ6DN03 193 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 HIST2H2BDQ6DRA6 164 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 Q75L30 129 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 FASTKD5Q7L8L6 764 aaKnown RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 SDCCAG8Q86SQ7 713 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 GPALPP1Q8IXQ4 340 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 C1orf52Q8N6N3 182 aaKnown RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 PDILTQ8N807 584 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ZNF248Q8NDW4 579 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 OR8K5Q8NH50 307 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ZNF524Q96C55 264 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ZNF501Q96CX3 271 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 ALG14Q96F25 216 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 DACH2Q96NX9 599 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 KAT14Q9H8E8 782 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ADPRHL2Q9NX46 363 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 RCC2Q9P258 522 aaKnown RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 R3HDM2Q9Y2K5 976 aaKnown RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 C2CD2Q9Y426 696 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 JRKLQ9Y4A0 524 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 SESN1Q9Y6P5 492 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 ARID4BQ4LE39 1312 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 ZNF644Q9H582 1327 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 KIF26BQ2KJY2 2108 aa3.11□□□□□ -1.91
SRP54-214ENST00000630962 GREB1LQ9C091 1923 aaPredicted RBP3.11□□□□□ -1.91
SRP54-214ENST00000630962 LIPT2A6NK58 231 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 SLCO1B7G3V0H7 640 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 TGFB1I1O43294 461 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 ZBTB43O43298 467 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 BMP10O95393 424 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 AGR2O95994 175 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 ICAM1P05362 532 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 CHRNB4P30926 498 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 HOXC8P31273 242 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 ICAM3P32942 547 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
SRP54-214ENST00000630962 KCNJ10P78508 379 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 CDC16Q13042 620 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 G3BP1Q13283 466 aaKnown RBP eCLIP3.1□□□□□ -1.91
SRP54-214ENST00000630962 TBCEQ15813 527 aaPredicted RBP3.1□□□□□ -1.91
SRP54-214ENST00000630962 TECRLQ5HYJ1 363 aa3.1□□□□□ -1.91
SRP54-214ENST00000630962 NSUN5P2Q63ZY6 315 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms