RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SLC30A1Q9Y6M5 507 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 EDDM13A0A1B0GTR0 161 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 AGAP14A8MT82 685 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 UPK3BL1B0FP48 263 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 UPK3BL2E5RIL1 263 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 EDF1O60869 148 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 NDUFS3O75489 264 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 SRP72O76094 671 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 KAT7O95251 611 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CYP2A6P11509 494 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 COL6A2P12110 1019 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 BGNP21810 368 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ARRB2P32121 409 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 HOXD12P35452 270 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 GRIA2P42262 883 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 IL12RB1P42701 662 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 DHPSP49366 369 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 SUOXP51687 545 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CACNG1Q06432 222 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 RALGDSQ12967 914 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ENPP2Q13822 863 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 POM121L1PQ3SYA9 428 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CCDC153Q494R4 210 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 C2orf27AQ580R0 203 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF805Q5CZA5 627 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 EGFLAMQ63HQ2 1017 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TCEAL6Q6IPX3 200 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM151BQ6UXP7 276 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 SERPINA13PQ6UXR4 307 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 FAM47EQ6ZV65 393 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 PARS2Q7L3T8 475 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 RABEPKQ7Z6M1 372 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 STK40Q8N2I9 435 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CBARPQ8N350 705 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 OR6Y1Q8NGX8 325 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CEP76Q8TAP6 659 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 HCAR2Q8TDS4 363 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 TCEAL3Q969E4 200 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 NXNL1Q96CM4 212 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 AARSD1Q9BTE6 412 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 CCDC68Q9H2F9 335 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 GALPQ9UBC7 116 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ACOT9Q9Y305 439 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 VWA7Q9Y334 891 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 ANKRD12Q6UB98 2062 aa9.42□□□□□ -0.9
PDLIM5-223ENST00000627587 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 A0A087X1B8 175 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 UBA6A0AVT1 1052 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 TK2O00142 265 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 BIRC5O15392 142 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PRAMEF1O95521 474 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PRNPP04156 253 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 FGF3P11487 239 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 GM2AP17900 193 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 XPAP23025 273 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 ALDH3A1P30838 453 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PPARGP37231 505 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 SPAM1P38567 509 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 P2RY2P41231 377 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 FOXC1Q12948 553 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 NFATC2Q13469 925 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 ELAVL3Q14576 367 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 DBN1Q16643 649 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 CTSL3PQ5NE16 218 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 ANO7Q6IWH7 933 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 TAS2R42Q7RTR8 314 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 OTOAQ7RTW8 1153 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 CCDC91Q7Z6B0 441 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 TBC1D1Q86TI0 1168 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 NAT14Q8WUY8 206 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PIGKQ92643 395 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 TTC1Q99614 292 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PITPNM3Q9BZ71 974 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 UNKQ9C0B0 810 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 MANSC1Q9H8J5 431 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF395Q9H8N7 513 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 THAP10Q9P2Z0 257 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 COPG2Q9UBF2 871 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 DKK3Q9UBP4 350 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 TMPRSS11EQ9UL52 423 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 USP24Q9UPU5 2620 aa9.41□□□□□ -0.9
PDLIM5-223ENST00000627587 GLYATL1P3A0A0U1RQE8 302 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 ERICH4A6NGS2 130 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 KLF11O14901 512 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 SNX3O60493 162 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 KLHL2O95198 593 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 TRIM16O95361 564 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 APOA4P06727 396 aa9.4□□□□□ -0.9
PDLIM5-223ENST00000627587 ZNF30P17039 623 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms