RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CAPNS1P04632 268 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 POLBP06746 335 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 JUNDP17535 347 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 FOXN2P32314 431 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 ELK3P41970 407 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 ACADVLP49748 655 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 BLKP51451 505 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 SRP54P61011 504 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 HNRNPKP61978 463 aaKnown RBP eCLIP14.55□□□□□ -0.08
PNKP-221ENST00000627317 GTF2H3Q13889 308 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 HP1BP3Q5SSJ5 553 aaPredicted RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 KIAA0930Q6ICG6 404 aaPredicted RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 ZDHHC24Q6UX98 284 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 UNQ6494/PRO21346Q6UXR6 183 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 MARK2Q7KZI7 788 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 RD3Q7Z3Z2 195 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 CCDC25Q86WR0 208 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 NXPE1Q8N323 547 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 EID2Q8N6I1 236 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 DDHD1Q8NEL9 900 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 CFAP36Q96G28 342 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 TTC25Q96NG3 672 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 TRIM56Q9BRZ2 755 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 FOXP3Q9BZS1 431 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 OR2AG1Q9H205 316 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 CARS2Q9HA77 564 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 CYP4F12Q9HCS2 524 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 CATSPERZQ9NTU4 200 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 VPS18Q9P253 973 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 MTRF1LQ9UGC7 380 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 APOBEC3BQ9UH17 382 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 TMPRSS11EQ9UL52 423 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 SLC17A4Q9Y2C5 497 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 BHMG1C9JSJ3 638 aaPredicted RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 CFAP99D6REC4 459 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 EIF3HO15372 352 aaKnown RBP eCLIP14.54□□□□□ -0.08
PNKP-221ENST00000627317 VEGFDO43915 354 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 MTX2O75431 263 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 USP1O94782 785 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 VAPBO95292 243 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 CSF2P04141 144 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 CEACAM5P06731 702 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 PROS1P07225 676 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 IVLP07476 585 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 PRSS56P0CW18 603 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 RALBP11234 206 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 MSH3P20585 1137 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 POLD2P49005 469 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 HK3P52790 923 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 DNAJC3Q13217 504 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 CRYMQ14894 314 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 FASTKD1Q53R41 847 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 AARS2Q5JTZ9 985 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 ZNF648Q5T619 568 aaPredicted RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 CCNI2Q6ZMN8 369 aaPredicted RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 MICALCLQ6ZW33 695 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 TMPRSS7Q7RTY8 843 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 TMEM135Q86UB9 458 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 SERPINA9Q86WD7 417 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 CCNJLQ8IV13 435 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 ANKMY2Q8IV38 441 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 IFT20Q8IY31 132 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 ZBED8Q8IZ13 594 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 RBFAQ8N0V3 343 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.54□□□□□ -0.08
PNKP-221ENST00000627317 ZNF548Q8NEK5 533 aaPredicted RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 OR4L1Q8NH43 312 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 OR4C6Q8NH72 309 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 DCUN1D1Q96GG9 259 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 CNDP2Q96KP4 475 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 TTC1Q99614 292 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 COPS8Q99627 209 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 PHACTR1Q9C0D0 580 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 TRIM39Q9HCM9 518 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 MRPL40Q9NQ50 206 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 ZC3H7BQ9UGR2 993 aaKnown RBP14.54□□□□□ -0.08
PNKP-221ENST00000627317 SUFUQ9UMX1 484 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 PCDHGA1Q9Y5H4 931 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 TEX264Q9Y6I9 313 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 DGKBQ9Y6T7 804 aa14.54□□□□□ -0.08
PNKP-221ENST00000627317 ITPR1Q14643 2758 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 TRBV5-4A0A0C4DH59 114 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 LY6G6EA0A0G2JKS1 128 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 GPR89AB7ZAQ6 455 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 E7ESA3 106 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 SCAMP1O15126 338 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 CDK14O94921 469 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 LDOC1O95751 146 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 TNFP01375 233 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 GPR89BP0CG08 455 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 CTSEP14091 401 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 ACRV1P26436 265 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 GNPDA1P46926 289 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 CDKN1CP49918 316 aaPredicted RBP14.53□□□□□ -0.08
PNKP-221ENST00000627317 CUL1Q13616 776 aa14.53□□□□□ -0.08
PNKP-221ENST00000627317 THOC5Q13769 683 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms