RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KIR2DS3K7RE56 304 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 PPM1DO15297 605 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 B4GAT1O43505 415 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 SNX2O60749 519 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 CAPNS1P04632 268 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 RPLP0P05388 317 aaKnown RBP16.5■□□□□ 0.23
UBE3D-208ENST00000626828 RALBP11234 206 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 F3P13726 295 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 TCP1P17987 556 aaKnown RBP16.5■□□□□ 0.23
UBE3D-208ENST00000626828 ITGALP20701 1170 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 IDSP22304 550 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 ADRA1DP25100 572 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 PSMA3P25788 255 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 GNG11P61952 73 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 CDK16Q00536 496 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 B4GALNT1Q00973 533 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 CYP4F3Q08477 520 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 SEPT6Q14141 434 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 KIR2DS5Q14953 304 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 NLRP9Q7RTR0 991 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 ZNF438Q7Z4V0 828 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 TRAPPC5Q8IUR0 188 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 ZNF547Q8IVP9 402 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 SFRP1Q8N474 314 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 RASGEF1AQ8N9B8 481 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 AVL9Q8NBF6 648 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 COG1Q8WTW3 980 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 SH3KBP1Q96B97 665 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 DNAJC1Q96KC8 554 aaKnown RBP16.5■□□□□ 0.23
UBE3D-208ENST00000626828 AP1M1Q9BXS5 423 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 EIF2B3Q9NR50 452 aaKnown RBP16.5■□□□□ 0.23
UBE3D-208ENST00000626828 PIH1D1Q9NWS0 290 aaKnown RBP16.5■□□□□ 0.23
UBE3D-208ENST00000626828 CRLS1Q9UJA2 301 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 AK5Q9Y6K8 562 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 A0A1W2PQM1 296 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 HEATR9A2RTY3 570 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 POP7O75817 140 aaKnown RBP16.49■□□□□ 0.23
UBE3D-208ENST00000626828 ALDH4A1P30038 563 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 AKT1P31749 480 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 MC4RP32245 332 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 CA5AP35218 305 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-208ENST00000626828 GRIA1P42261 906 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 FASLGP48023 281 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 NPY2RP49146 381 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
UBE3D-208ENST00000626828 NR1D2Q14995 579 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 CLPPQ16740 277 aaPredicted RBP16.49■□□□□ 0.23
UBE3D-208ENST00000626828 WASH2PQ6VEQ5 465 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 SPRED1Q7Z699 444 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 SLC9B2Q86UD5 537 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 AMZ2Q86W34 360 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 NXPE2Q96DL1 559 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 DCUN1D1Q96GG9 259 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 RANBP9Q96S59 729 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 OSGEPL1Q9H4B0 414 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 STN1Q9H668 368 aaKnown RBP16.49■□□□□ 0.23
UBE3D-208ENST00000626828 SYNDIG1Q9H7V2 258 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 WASH6PQ9NQA3 447 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 PRDM8Q9NQV8 689 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
UBE3D-208ENST00000626828 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 KLHL33A6NCF5 533 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 A6NCN8 305 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 CFAP99D6REC4 459 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 GPR39O43194 453 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 EML2O95834 649 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 KRT14P02533 472 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-208ENST00000626828 OR1D5P58170 312 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 SQSTM1Q13501 440 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 ST3GAL2Q16842 350 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 ZRANB3Q5FWF4 1079 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 CCDC137Q6PK04 289 aaKnown RBP16.48■□□□□ 0.23
UBE3D-208ENST00000626828 ABRAXAS1Q6UWZ7 409 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 TAS2R42Q7RTR8 314 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 PIM3Q86V86 326 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 LSMEM2Q8N112 164 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 NXPE1Q8N323 547 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 SLC37A2Q8TED4 501 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 ZCCHC14Q8WYQ9 949 aaKnown RBP16.48■□□□□ 0.23
UBE3D-208ENST00000626828 SGF29Q96ES7 293 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 TMEM74Q96NL1 305 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 COPS8Q99627 209 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 FAM96AQ9H5X1 160 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 SARS2Q9NP81 518 aaKnown RBP16.48■□□□□ 0.23
UBE3D-208ENST00000626828 DNAJC16Q9Y2G8 782 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 PCDHB1Q9Y5F3 818 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 ENTPD2Q9Y5L3 495 aa16.48■□□□□ 0.23
UBE3D-208ENST00000626828 PIKFYVEQ9Y2I7 2098 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 TRBV5-4A0A0C4DH59 114 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 PRR19A6NJB7 356 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 OR2AG2A6NM03 316 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms