RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 INTS10Q9NVR2 710 aaKnown RBP16.4■□□□□ 0.22
CCNA1-203ENST00000625767 GALPQ9UBC7 116 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TLDC2A0PJX2 215 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 DLL1O00548 723 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 NIPSNAP2O75323 286 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CEACAM5P06731 702 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 PYGLP06737 847 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 ITGB6P18564 788 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 MSH3P20585 1137 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CD38P28907 300 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CNR2P34972 360 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 GMPRP36959 345 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 GP5P40197 560 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 MSH2P43246 934 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CSNK1EP49674 416 aaKnown RBP16.4■□□□□ 0.22
CCNA1-203ENST00000625767 RACK1P63244 317 aaKnown RBP16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TIAL1Q01085 375 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCNA1-203ENST00000625767 IFFO1Q0D2I5 559 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 ITIH4Q14624 930 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TCEA2Q15560 299 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 ZNF542PQ5EBM4 170 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 LDLRAP1Q5SW96 308 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 ENPP7Q6UWV6 458 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 KIAA0408Q6ZU52 694 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 ZNF547Q8IVP9 402 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 RBFAQ8N0V3 343 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CYP4X1Q8N118 509 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TSACCQ96A04 125 aaPredicted RBP16.4■□□□□ 0.22
CCNA1-203ENST00000625767 VPS39Q96JC1 886 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TCF12Q99081 682 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CAB39LQ9H9S4 337 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 FSCN3Q9NQT6 498 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 TM7SF3Q9NS93 570 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 MED16Q9Y2X0 877 aa16.4■□□□□ 0.22
CCNA1-203ENST00000625767 CACNB4O00305 520 aaPredicted RBP16.39■□□□□ 0.21
CCNA1-203ENST00000625767 PRMT5O14744 637 aaPredicted RBP16.39■□□□□ 0.21
CCNA1-203ENST00000625767 CDK14O94921 469 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 INHBAP08476 426 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
CCNA1-203ENST00000625767 ZNF7P17097 686 aaPredicted RBP16.39■□□□□ 0.21
CCNA1-203ENST00000625767 NUDT1P36639 197 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 NSG1P42857 185 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 KIAA1024LP59773 190 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 ZNF460Q14592 562 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 NFATC4Q14934 902 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 PLA2G4EQ3MJ16 856 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 WDR45BQ5MNZ6 344 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 MROH9Q5TGP6 573 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 CRTC3Q6UUV7 619 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 SPATS2Q86XZ4 545 aaKnown RBP16.39■□□□□ 0.21
CCNA1-203ENST00000625767 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 OR1E3Q8WZA6 343 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 PIGKQ92643 395 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 OLFM1Q99784 485 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 RHOJQ9H4E5 214 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 EURLQ9NYK6 297 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 MOSPD1Q9UJG1 213 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 PILRBQ9UKJ0 227 aa16.39■□□□□ 0.21
CCNA1-203ENST00000625767 RALGAPA1Q6GYQ0 2036 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 BCAT2O15382 392 aaPredicted RBP16.38■□□□□ 0.21
CCNA1-203ENST00000625767 DNAJC6O75061 913 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 SAT1P21673 171 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 RABIFP47224 123 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 LIMK2P53671 638 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 CDKN2DP55273 166 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 NAB1Q13506 487 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 CCDC6Q16204 474 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 PRAMEF14Q5SWL7 426 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 LYPLAL1Q5VWZ2 237 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 TMEM220Q6QAJ8 160 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 ADGRD1Q6QNK2 874 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 GALNT7Q86SF2 657 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 PIM3Q86V86 326 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 C11orf74Q86VG3 221 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 KLHDC7BQ96G42 594 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 DCUN1D1Q96GG9 259 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 CLPBQ9H078 707 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 TCEAL2Q9H3H9 227 aaPredicted RBP16.38■□□□□ 0.21
CCNA1-203ENST00000625767 TXNDC16Q9P2K2 825 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 FAM8A1Q9UBU6 413 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 KLF15Q9UIH9 416 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 SUFUQ9UMX1 484 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 SLC17A4Q9Y2C5 497 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 PLEKHM1Q9Y4G2 1056 aa16.38■□□□□ 0.21
CCNA1-203ENST00000625767 FAM95CA0A1B0GW59 222 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 PATE3B3GLJ2 98 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 AGPSO00116 658 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 DYNC1I1O14576 645 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 ITGA2BP08514 1039 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 PKMP14618 531 aaKnown RBP16.37■□□□□ 0.21
CCNA1-203ENST00000625767 THOP1P52888 689 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 NUBP1P53384 320 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 CSE1LP55060 971 aaKnown RBP16.37■□□□□ 0.21
CCNA1-203ENST00000625767 YPEL5P62699 121 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 FZD2Q14332 565 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 TMED2Q15363 201 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
CCNA1-203ENST00000625767 RNF187Q5TA31 235 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms