RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC7A6OSQ96CW6 309 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 CSPG4P5Q96PW8 444 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SNTG1Q9NSN8 517 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SNTG2Q9NY99 539 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FAM159BA6NKW6 160 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CSH1P0DML2 217 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CSH2P0DML3 217 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZNF182P17025 639 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 F8A1P23610 371 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 STOMP27105 288 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 NFIAQ12857 509 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 CYP20A1Q6UW02 462 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 LRRC58Q96CX6 371 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 LINGO1Q96FE5 620 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FGFBP2Q9BYJ0 223 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 H7C2Y5 167 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 AKAP8O43823 692 aaKnown RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 NOBOXO60393 691 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 UGT2B17O75795 530 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 RPN2P04844 631 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 MAGEA2P43356 314 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 DEFA5Q01523 94 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TLR1Q15399 786 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZNF438Q7Z4V0 828 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SLC35B2Q8TB61 432 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 GAD1Q99259 594 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 TNFSF13BQ9Y275 285 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 DCCP43146 1447 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SLITRK5O94991 958 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SNX4O95219 450 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 OAS1P00973 400 aaKnown RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 MT-ND1P03886 318 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ASMTP46597 345 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 SLC25A52Q3SY17 297 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 RETSATQ6NUM9 610 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FBXO42Q6P3S6 717 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 ZNF613Q6PF04 617 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 BTN2A1Q7KYR7 527 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 FSTL5Q8N475 847 aaPredicted RBP8.84□□□□□ -0.99
VCL-206ENST00000623461 CPNE5Q9HCH3 593 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 NUDT4Q9NZJ9 180 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 MAB21L2Q9Y586 359 aa8.84□□□□□ -0.99
VCL-206ENST00000623461 B3GAT3O94766 335 aa8.83□□□□□ -1
VCL-206ENST00000623461 CCNB2O95067 398 aa8.83□□□□□ -1
VCL-206ENST00000623461 OR5F1O95221 314 aa8.83□□□□□ -1
VCL-206ENST00000623461 CATP04040 527 aaKnown RBP8.83□□□□□ -1
VCL-206ENST00000623461 ANXA8P13928 327 aa8.83□□□□□ -1
VCL-206ENST00000623461 OR1G1P47890 313 aa8.83□□□□□ -1
VCL-206ENST00000623461 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
VCL-206ENST00000623461 TEAD4Q15561 434 aa8.83□□□□□ -1
VCL-206ENST00000623461 CTC1Q2NKJ3 1217 aa8.83□□□□□ -1
VCL-206ENST00000623461 PTPN20Q4JDL3 420 aa8.83□□□□□ -1
VCL-206ENST00000623461 HID1Q8IV36 788 aa8.83□□□□□ -1
VCL-206ENST00000623461 TOR1AIP2Q8NFQ8 470 aa8.83□□□□□ -1
VCL-206ENST00000623461 OXCT2Q9BYC2 517 aaPredicted RBP8.83□□□□□ -1
VCL-206ENST00000623461 GLOD4Q9HC38 313 aa8.83□□□□□ -1
VCL-206ENST00000623461 RGS17Q9UGC6 210 aaPredicted RBP8.83□□□□□ -1
VCL-206ENST00000623461 RPL36Q9Y3U8 105 aaKnown RBP8.83□□□□□ -1
VCL-206ENST00000623461 ST14Q9Y5Y6 855 aa8.83□□□□□ -1
VCL-206ENST00000623461 GPR182O15218 404 aa8.83□□□□□ -1
VCL-206ENST00000623461 DYNC1LI2O43237 492 aaPredicted RBP8.83□□□□□ -1
VCL-206ENST00000623461 NPPAP01160 153 aa8.83□□□□□ -1
VCL-206ENST00000623461 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
VCL-206ENST00000623461 VTNP04004 478 aa8.83□□□□□ -1
VCL-206ENST00000623461 TFPTP0C1Z6 253 aa8.83□□□□□ -1
VCL-206ENST00000623461 HPGDP15428 266 aa8.83□□□□□ -1
VCL-206ENST00000623461 CCNCP24863 283 aa8.83□□□□□ -1
VCL-206ENST00000623461 DNAJA1P31689 397 aaKnown RBP8.83□□□□□ -1
VCL-206ENST00000623461 KIR3DL1P43629 444 aa8.83□□□□□ -1
VCL-206ENST00000623461 OAZ1P54368 228 aa8.83□□□□□ -1
VCL-206ENST00000623461 SEMA5AQ13591 1074 aa8.83□□□□□ -1
VCL-206ENST00000623461 HECTD3Q5T447 861 aa8.83□□□□□ -1
VCL-206ENST00000623461 USP30Q70CQ3 517 aa8.83□□□□□ -1
VCL-206ENST00000623461 ADAM32Q8TC27 787 aa8.83□□□□□ -1
VCL-206ENST00000623461 CCDC115Q96NT0 180 aa8.83□□□□□ -1
VCL-206ENST00000623461 ATP13A1Q9HD20 1204 aa8.83□□□□□ -1
VCL-206ENST00000623461 DNAJC11Q9NVH1 559 aa8.83□□□□□ -1
VCL-206ENST00000623461 ADAMTS6Q9UKP5 1117 aa8.83□□□□□ -1
VCL-206ENST00000623461 FPGTO14772 594 aa8.83□□□□□ -1
VCL-206ENST00000623461 INMTO95050 263 aa8.83□□□□□ -1
VCL-206ENST00000623461 EPORP19235 508 aa8.83□□□□□ -1
VCL-206ENST00000623461 STT3AP46977 705 aa8.83□□□□□ -1
VCL-206ENST00000623461 ATP4BP51164 291 aa8.83□□□□□ -1
VCL-206ENST00000623461 CBLBQ13191 982 aa8.83□□□□□ -1
VCL-206ENST00000623461 TBRG1Q3YBR2 411 aa8.83□□□□□ -1
VCL-206ENST00000623461 CLEC6AQ6EIG7 209 aa8.83□□□□□ -1
VCL-206ENST00000623461 TMBIM1Q969X1 311 aa8.83□□□□□ -1
VCL-206ENST00000623461 KCTD7Q96MP8 289 aa8.83□□□□□ -1
VCL-206ENST00000623461 POLR3BQ9NW08 1133 aaPredicted RBP8.83□□□□□ -1
VCL-206ENST00000623461 SLIT3O75094 1523 aa8.83□□□□□ -1
VCL-206ENST00000623461 ABCC6O95255 1503 aa8.83□□□□□ -1
VCL-206ENST00000623461 A0A088AWK7 358 aa8.83□□□□□ -1
VCL-206ENST00000623461 ANKDD1BA6NHY2 528 aa8.83□□□□□ -1
VCL-206ENST00000623461 STX16-NPEPL1H3BU86 382 aa8.83□□□□□ -1
VCL-206ENST00000623461 AP3D1O14617 1153 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms