RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 BHMG1C9JSJ3 638 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 MYF5P13349 255 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 TRIP6Q15654 476 aaKnown RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 DBN1Q16643 649 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 C6orf132Q5T0Z8 1188 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ARMC3Q5W041 872 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 LVRNQ6Q4G3 990 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 AFTPHQ6ULP2 937 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 CRTC3Q6UUV7 619 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 XKR5Q6UX68 686 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 CHST15Q7LFX5 561 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SERPINA9Q86WD7 417 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SDR16C5Q8N3Y7 309 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 MMGT1Q8N4V1 131 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 APOLD1Q96LR9 279 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 DUSP23Q9BVJ7 150 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 IL1RAPL1Q9NZN1 696 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 MARCH4Q9P2E8 410 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ZNHIT2Q9UHR6 403 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 GPSM3Q9Y4H4 160 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 COL27A1Q8IZC6 1860 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SPAARA0A1B0GVQ0 90 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 OR2AG2A6NM03 316 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ZNF500O60304 480 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ACP5P13686 325 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 PRAMEP78395 509 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SLC7A5Q01650 507 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 DNAJC3Q13217 504 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 LRP8Q14114 963 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 INAVAQ3KP66 663 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ZCCHC8Q6NZY4 707 aaKnown RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SLC30A9Q6PML9 568 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 TAF8Q7Z7C8 310 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 LRRTM4Q86VH4 590 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 GKN2Q86XP6 184 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SLC35F3Q8IY50 421 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 BEND7Q8N7W2 519 aaPredicted RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 OR4L1Q8NH43 312 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SEC14L1Q92503 715 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ULK4Q96C45 1275 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SGF29Q96ES7 293 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 CNDP2Q96KP4 475 aaKnown RBP14.12□□□□□ -0.15
CBWD3-217ENST00000621474 SLC32A1Q9H598 525 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 ZDHHC3Q9NYG2 299 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 TAAR2Q9P1P5 351 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 WHRNQ9P202 907 aa14.12□□□□□ -0.15
CBWD3-217ENST00000621474 A6NCN8 305 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 SMAPO00193 183 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 NOBOXO60393 691 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 DKK1O94907 266 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 VAPBO95292 243 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 EML2O95834 649 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 ANXA6P08133 673 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 ILF3Q12906 894 aaKnown RBP eCLIP14.11□□□□□ -0.15
CBWD3-217ENST00000621474 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
CBWD3-217ENST00000621474 PLA2G4EQ3MJ16 856 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 ANKRD20A4Q4UJ75 823 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 KIAA0930Q6ICG6 404 aaPredicted RBP14.11□□□□□ -0.15
CBWD3-217ENST00000621474 C8orf74Q6P047 294 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 CASC4Q6P4E1 433 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 DET1Q7L5Y6 550 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 LDB1Q86U70 411 aaPredicted RBP14.11□□□□□ -0.15
CBWD3-217ENST00000621474 NAGSQ8N159 534 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 GPR156Q8NFN8 814 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 OR6P1Q8NGX9 317 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 COPS8Q99627 209 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 CDC6Q99741 560 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 GSDMCQ9BYG8 508 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 ZCCHC2Q9C0B9 1178 aaKnown RBP14.11□□□□□ -0.15
CBWD3-217ENST00000621474 FTSJ1Q9UET6 329 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 GPR34Q9UPC5 381 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 KCNK6Q9Y257 313 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 RPS6KL1Q9Y6S9 549 aa14.11□□□□□ -0.15
CBWD3-217ENST00000621474 PTPRBP23467 1997 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 MAGEB16A2A368 324 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CTAGE15A4D2H0 777 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 GOLGA8KD6RF30 607 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 E7ESA3 106 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 GOLGA8TH3BQL2 631 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 TNFSF14O43557 240 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 OR1I1O60431 355 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 USP1O94782 785 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 LDOC1O95751 146 aaPredicted RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CTAGE8P0CG41 777 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ALPPL2P10696 532 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CKMT1AP12532 417 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ATP1B2P14415 290 aaPredicted RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 MSH3P20585 1137 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 AKT1P31749 480 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ACTR1BP42025 376 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ACADVLP49748 655 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 ACTR1AP61163 376 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 CBLBQ13191 982 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 FASTKD3Q14CZ7 662 aaKnown RBP14.1□□□□□ -0.15
CBWD3-217ENST00000621474 PPM1JQ5JR12 505 aa14.1□□□□□ -0.15
CBWD3-217ENST00000621474 OGFOD3Q6PK18 319 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms