RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PANX1Q96RD7 426 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ACTR6Q9GZN1 396 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 POLR1EQ9GZS1 481 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 THUMPD1Q9NXG2 353 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 KIF20BQ96Q89 1820 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ANXA2P2A6NMY6 339 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MUSKO15146 869 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 EDF1O60869 148 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SGPL1O95470 568 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ITGB3P05106 788 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ANXA2P07355 339 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MLLT6P55198 1093 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 IRF8Q02556 426 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NEPROQ6NW34 567 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TRMT11Q7Z4G4 463 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SCUBE3Q8IX30 993 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 RNF148Q8N7C7 305 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 PPP1R16AQ96I34 528 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CENPOQ9BU64 300 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NUSAP1Q9BXS6 441 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 LRRC19Q9H756 370 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 KBTBD4Q9NVX7 518 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MYO3AQ8NEV4 1616 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DPPA5A6NC42 116 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 EFCAB9A8MZ26 197 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF208O43345 1280 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF311Q5JNZ3 666 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DNAJC14Q6Y2X3 702 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 UBR7Q8N806 425 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ART4Q93070 314 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CERS2Q96G23 380 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 BARX2Q9UMQ3 279 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MRPS33Q9Y291 106 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 AZIN1O14977 448 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ITGA2BP08514 1039 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 UROSP10746 265 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CD72P21854 359 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TSPAN5P62079 268 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 LARS2Q15031 903 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MOGQ16653 247 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CNPY1Q3B7I2 92 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF829Q3KNS6 432 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 GPR158Q5T848 1215 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 CRTC1Q6UUV9 634 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NCCRP1Q6ZVX7 275 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SNX20Q7Z614 316 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 AMIGO1Q86WK6 493 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 KIF18BQ86Y91 864 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SIRT2Q8IXJ6 389 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ARMC5Q96C12 935 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 C12orf43Q96C57 262 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 C16orf58Q96GQ5 468 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SH2D3AQ9BRG2 576 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 MYNNQ9NPC7 610 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRE2Q9UHX3 823 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 POFUT2Q9Y2G5 429 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF780BQ9Y6R6 833 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 FRMPD4Q14CM0 1322 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 SULT1B1O43704 296 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ENTPD6O75354 484 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TACSTD2P09758 323 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 HGFP14210 728 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DUS1LQ6P1R4 473 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZYG11AQ6WRX3 759 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 OTOP2Q7RTS6 562 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TAS1R3Q7RTX0 852 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRF2Q8IZF7 708 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRG2Q8IZP9 1017 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ARMC10Q8N2F6 343 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 RXFP2Q8WXD0 754 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 KCTD7Q96MP8 289 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 TRNT1Q96Q11 434 aaKnown RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 OR52E6Q96RD3 313 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 DENND2DQ9H6A0 471 aaPredicted RBP7.12□□□□□ -1.27
COLCA1-205ENST00000620864 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF358Q9NW07 568 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 NKIRAS2Q9NYR9 191 aa7.12□□□□□ -1.27
COLCA1-205ENST00000620864 FAM237BA0A1B0GVD1 139 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GNAZP19086 355 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 KLK7P49862 253 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CREMQ03060 361 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PTPN11Q06124 597 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OGFRL1Q5TC84 451 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NT5DC1Q5TFE4 455 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 C1orf94Q6P1W5 598 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CREG2Q8IUH2 290 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 UNC5BQ8IZJ1 945 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MAB21L3Q8N8X9 362 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PPP1R13LQ8WUF5 828 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 APBA2Q99767 749 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TOR3AQ9H497 397 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TRPV4Q9HBA0 871 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CDH22Q9UJ99 828 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 BORCS7-ASMTA0A0B4J1R7 106 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 H3BM21 787 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SLC15A1P46059 708 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms