RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 PPP3CCP48454 512 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 GEMP55040 296 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 OR4D2P58180 307 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 EFEMP1Q12805 493 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 CCNYL2Q5T2Q4 361 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 DEPDC1Q5TB30 811 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 HECTD2Q5U5R9 776 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 HORMAD1Q86X24 394 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 PSMA8Q8TAA3 256 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 PTERQ96BW5 349 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 BIRC7Q96CA5 298 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 HSFY1Q96LI6 401 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 CDK15Q96Q40 435 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 SLC30A3Q99726 388 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 MRPL9Q9BYD2 267 aaKnown RBP6.9□□□□□ -1.3
NEDD9-216ENST00000620854 GSTO2Q9H4Y5 243 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 NANOGQ9H9S0 305 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 ABCB10Q9NRK6 738 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 WWOXQ9NZC7 414 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 INVSQ9Y283 1065 aa6.9□□□□□ -1.3
NEDD9-216ENST00000620854 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.3
NEDD9-216ENST00000620854 AAR2Q9Y312 384 aaKnown RBP6.9□□□□□ -1.3
NEDD9-216ENST00000620854 MYBPHLA2RUH7 354 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 H7C4K7 107 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 FXYD1O00168 92 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 AXIN1O15169 862 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SNAP91O60641 907 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CNOT3O75175 753 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 BCAS1O75363 584 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SH3BGRLO75368 114 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CNTN5O94779 1100 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 RASAL1O95294 804 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 RFC2P35250 354 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 HPCAL1P37235 193 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ARCN1P48444 511 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ARSDP51689 593 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 VBP1P61758 197 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CREB5Q02930 508 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 AQP6Q13520 282 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 BROXQ5VW32 411 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 GLYATQ6IB77 296 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 NIPAL1Q6NVV3 410 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SPESP1Q6UW49 350 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CLEC20AQ6ZU45 233 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ADCK2Q7Z695 626 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 GALNT5Q7Z7M9 940 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CLYBLQ8N0X4 340 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ZCCHC7Q8N3Z6 543 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CHPT1Q8WUD6 406 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CAPSLQ8WWF8 208 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 TMBIM1Q969X1 311 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SENP8Q96LD8 212 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 MYRFLQ96LU7 910 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 IL12RB2Q99665 862 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 DUSP16Q9BY84 665 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM30AQ9NV96 361 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ATAD3AQ9NVI7 634 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SCN3BQ9NY72 215 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ACTR3BQ9P1U1 418 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 MARCH4Q9P2E8 410 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 KLQ9UEF7 1012 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 PTBP2Q9UKA9 531 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 UTS2RQ9UKP6 389 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 TRHDEQ9UKU6 1024 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SMIM28A0A1B0GU29 152 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 FAM155AB1AL88 458 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 KPNA4O00629 521 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 AZIN1O14977 448 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 NADKO95544 446 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 GUCA1CO95843 209 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 URODP06132 367 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 HSMCR30P0CW71 290 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 RGS4P49798 205 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 DGKQP52824 942 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ATP6AP1Q15904 470 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 UNC50Q53HI1 259 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 INTS11Q5TA45 600 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 FAM45BPQ6NSW5 357 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 SLC2A7Q6PXP3 512 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 MILR1Q7Z6M3 343 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC103Q8IW40 242 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 MFSD2AQ8NA29 543 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 FAM45AQ8TCE6 357 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 DPF3Q92784 378 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 NDEL1Q9GZM8 345 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 WDR6Q9NNW5 1121 aaKnown RBP6.9□□□□□ -1.31
NEDD9-216ENST00000620854 RGS18Q9NS28 235 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 PCDHB3Q9Y5E6 796 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 PCDHGA8Q9Y5G5 932 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 CPQQ9Y646 472 aa6.9□□□□□ -1.31
NEDD9-216ENST00000620854 ARID2Q68CP9 1835 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 LY75O60449 1722 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 CLDN25C9JDP6 229 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 H0Y858 1186 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 PSMD11O00231 422 aa6.89□□□□□ -1.31
NEDD9-216ENST00000620854 HS6ST1O60243 411 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms