RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LINGO2Q7L985 606 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PLD5Q8N7P1 536 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF304Q9HCX3 659 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 DDIT4Q9NX09 232 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 hCG_1818297A0A087WSY0 165 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 A0A087X1B8 175 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RCAN1P53805 252 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ARHGEF7Q14155 803 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PAMR1Q6UXH9 720 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GPSM1Q86YR5 675 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 IFNL1Q8IU54 200 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 STK40Q8N2I9 435 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ELMOD1Q8N336 334 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZSCAN1Q8NBB4 408 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MNTQ99583 582 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SSX3Q99909 188 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ADAMTS13Q76LX8 1427 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MAGEB16A2A368 324 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ADAM23O75077 832 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GPIP06744 558 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 FGFR1P11362 822 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 VDRP11473 427 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF35P13682 527 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 NOS3P29474 1203 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 S100A3P33764 101 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CD86P42081 329 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CRKP46108 304 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CDH12P55289 794 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ITGA1P56199 1179 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PRKCZQ05513 592 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CCDC36Q8IYA8 594 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MCPH1Q8NEM0 835 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF606Q8WXB4 792 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ERMAPQ96PL5 475 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 EPB41L4BQ9H329 900 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MAP3K20Q9NYL2 800 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 HSFX1Q9UBD0 423 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RHCGQ9UBD6 479 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 LEF1Q9UJU2 399 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 CMAHPQ9Y471 501 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 OR14I1A6ND48 311 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 DYNC1LI2O43237 492 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 ACADLP28330 430 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CTSKP43235 329 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TSPAN5P62079 268 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 KHDRBS2Q5VWX1 349 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 PAQR7Q86WK9 346 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ASB15Q8WXK1 588 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 GBA3Q9H227 469 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF408Q9H9D4 720 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ADAMTS12P58397 1594 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 UBE2QL1A1L167 161 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CCDC85CA6NKD9 419 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 F5H6K3 240 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 SLC22A1O15245 554 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PLIN3O60664 434 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RASAL1O95294 804 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 FOSL1P15407 271 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 RNF144AP50876 292 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 NOL9Q5SY16 702 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 ATF7IP2Q5U623 682 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 PXYLP1Q8TE99 480 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CINPQ9BW66 212 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 RBM22Q9NW64 420 aaKnown RBP eCLIP5□□□□□ -1.612e-7■■■■□ 24.2
VPS13D-214ENST00000620676 ERAP1Q9NZ08 941 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 XPR1Q9UBH6 696 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 A0A1W2PPK0 400 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 OR2AT4A6NND4 320 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 CXCR6O00574 342 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 OR2B3O76000 313 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 FAM163BP0C2L3 166 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 ALDH3A2P51648 485 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MLLT10P55197 1068 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 FOXRED2Q8IWF2 684 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 TBC1D15Q8TC07 691 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 HEXDCQ8WVB3 486 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 HMGB4Q8WW32 186 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 MRPL57Q9BQC6 102 aaKnown RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 UNC93B1Q9H1C4 597 aa5□□□□□ -1.61
VPS13D-214ENST00000620676 EVLQ9UI08 416 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 FARP1Q9Y4F1 1045 aaPredicted RBP5□□□□□ -1.61
VPS13D-214ENST00000620676 NR3C2P08235 984 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 COX7A2P14406 83 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TCEA2Q15560 299 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BICRALQ6AI39 1079 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FAM183BPQ6ZVS7 135 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 KCNK13Q9HB14 408 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJC27Q9NZQ0 273 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 NEMP2A6NFY4 417 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 UPK1BO75841 260 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GBE1Q04446 702 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF181Q2M3W8 571 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TXNRD3NBQ6F5E7 133 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 LIX1Q8N485 282 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 OR2T12Q8NG77 320 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TRPM4Q8TD43 1214 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 USP7Q93009 1102 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MUC3BQ9H195 1237 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CYP3A43Q9HB55 503 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FAM220BPB1ANY3 271 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms