RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 OR1I1O60431 355 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 SPAG6O75602 509 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 CDK14O94921 469 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 ASMTLO95671 621 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 CSF2P04141 144 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 MCM3P25205 808 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 SLC1A2P43004 574 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 MGAT5Q09328 741 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 SPEM2Q0P670 501 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 CTBP1Q13363 440 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 ZNF423Q2M1K9 1284 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 ZNF542PQ5EBM4 170 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 SDCCAG8Q86SQ7 713 aaPredicted RBP22.39■■□□□ 1.18
CBWD3-213ENST00000618217 ZNF547Q8IVP9 402 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 AENQ8WTP8 325 aaKnown RBP22.39■■□□□ 1.18
CBWD3-213ENST00000618217 FUT8Q9BYC5 575 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 RMI1Q9H9A7 625 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 PARD6AQ9NPB6 346 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 SMYD2Q9NRG4 433 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 FBXO5Q9UKT4 447 aa22.39■■□□□ 1.18
CBWD3-213ENST00000618217 TUBBP07437 444 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 NME1P15531 152 aaKnown RBP22.39■■□□□ 1.17
CBWD3-213ENST00000618217 MSH3P20585 1137 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 AKT1P31749 480 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 HK3P52790 923 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 CTSCP53634 463 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 PMS2P54278 862 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 PPARDQ03181 441 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 SHBQ15464 509 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 CSRP2Q16527 193 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 HLA-BQ31612 363 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 PYCR3Q53H96 274 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 ZNF789Q5FWF6 425 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 TRMT10CQ7L0Y3 403 aaKnown RBP22.39■■□□□ 1.17
CBWD3-213ENST00000618217 ASCL5Q7RTU5 278 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 DCLK2Q8N568 766 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 C2CD4AQ8NCU7 369 aaPredicted RBP22.39■■□□□ 1.17
CBWD3-213ENST00000618217 NAT14Q8WUY8 206 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 ZCCHC2Q9C0B9 1178 aaKnown RBP22.39■■□□□ 1.17
CBWD3-213ENST00000618217 CYP4F12Q9HCS2 524 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 SEMA4GQ9NTN9 838 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 SUFUQ9UMX1 484 aa22.39■■□□□ 1.17
CBWD3-213ENST00000618217 RIF1Q5UIP0 2472 aaKnown RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 LNP1A1A4G5 178 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 FAM159BA6NKW6 160 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 SYPP08247 313 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 ATP1B2P14415 290 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 ENGP17813 658 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 GABRB3P28472 473 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 PMLP29590 882 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 PPARGP37231 505 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 RXRGP48443 463 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 SF3A2Q15428 464 aaKnown RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 MARK2Q7KZI7 788 aaKnown RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 HID1Q8IV36 788 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 RBFAQ8N0V3 343 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 CLDN19Q8N6F1 224 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 OTUD6BQ8N6M0 293 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 LPGAT1Q92604 370 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 SGF29Q96ES7 293 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 ELF4Q99607 663 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 TTC1Q99614 292 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 EPB41L4BQ9H329 900 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 TCEAL2Q9H3H9 227 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 VPS37BQ9H9H4 285 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 PPANQ9NQ55 473 aaKnown RBP22.38■■□□□ 1.17
CBWD3-213ENST00000618217 DNAJC28Q9NX36 388 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 SLC17A6Q9P2U8 582 aa22.38■■□□□ 1.17
CBWD3-213ENST00000618217 CXorf49A8MYA2 514 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-213ENST00000618217 PIAS1O75925 651 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 RASGRP1O95267 797 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 F7P08709 466 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-213ENST00000618217 NSG1P42857 185 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 IL27RAQ6UWB1 636 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 KIAA0408Q6ZU52 694 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 PHACTR4Q8IZ21 702 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 FBF1Q8TES7 1133 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 DCUN1D1Q96GG9 259 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 P2RY12Q9H244 342 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 INTS10Q9NVR2 710 aaKnown RBP22.37■■□□□ 1.17
CBWD3-213ENST00000618217 RABGEF1Q9UJ41 708 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 PRSS21Q9Y6M0 314 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 ZNF292O60281 2723 aa22.37■■□□□ 1.17
CBWD3-213ENST00000618217 ZFC3H1O60293 1989 aaKnown RBP22.37■■□□□ 1.17
CBWD3-213ENST00000618217 CFAP99D6REC4 459 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 DYNC1I1O14576 645 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 NDUFS3O75489 264 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 ACSL3O95573 720 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 RALBP11234 206 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 JUNDP17535 347 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 LEPRP48357 1165 aaKnown RBP22.36■■□□□ 1.17
CBWD3-213ENST00000618217 ADARP55265 1226 aaKnown RBP22.36■■□□□ 1.17
CBWD3-213ENST00000618217 MPP1Q00013 466 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 RNF187Q5TA31 235 aaPredicted RBP22.36■■□□□ 1.17
CBWD3-213ENST00000618217 RD3Q7Z3Z2 195 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 C11orf96Q7Z7L8 435 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 GALNT7Q86SF2 657 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 BIRC8Q96P09 236 aa22.36■■□□□ 1.17
CBWD3-213ENST00000618217 CARS2Q9HA77 564 aaKnown RBP22.36■■□□□ 1.17
CBWD3-213ENST00000618217 IL21RQ9HBE5 538 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms