RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SORCS1Q8WY21 1168 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ASIC4Q96FT7 647 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 GCNAQ96QF7 691 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 COPS7BQ9H9Q2 264 aaPredicted RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 IL26Q9NPH9 171 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ASAH2Q9NR71 780 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 NPIPB15A6NHN6 443 aaPredicted RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 TXNDC9O14530 226 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 MRASO14807 208 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 GIPC1O14908 333 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 OLFM2O95897 454 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 UGT2B4P06133 528 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ACADSP16219 412 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ME2P23368 584 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CACNG1Q06432 222 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 TGFBIQ15582 683 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CHRNA6Q15825 494 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 SFT2D3Q587I9 215 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 SYVN1Q86TM6 617 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ING5Q8WYH8 240 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ATP6V1E2Q96A05 226 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 PLEKHG4BQ96PX9 1271 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CACNA2D2Q9NY47 1150 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 POLG2Q9UHN1 485 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ZNF225Q9UK10 706 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 A0A0J9YYE9 177 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 LILRB3O75022 631 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 TRBC1P01850 177 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 SNRPB2P08579 225 aaKnown RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 ZCCHC18P0CG32 403 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 BPIP17213 487 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 HOXB8P17481 243 aaPredicted RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 PPM1AP35813 382 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 PTGER3P43115 390 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ATP6V0D1P61421 351 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 YBX1P67809 324 aaKnown RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 NFKB2Q00653 900 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 PLIN5Q00G26 463 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 LCP2Q13094 533 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CAPRIN1Q14444 709 aaKnown RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 TEAD2Q15562 447 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 MPPE1Q53F39 396 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CHSY3Q70JA7 882 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 FUNDC1Q8IVP5 155 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ADGRG2Q8IZP9 1017 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 NUDT8Q8WV74 236 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 HACD3Q9P035 362 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
CIITA-212ENST00000618207 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
CIITA-212ENST00000618207 GOLGA4Q13439 2230 aaKnown RBP12.27□□□□□ -0.44
CIITA-212ENST00000618207 SYCE1LA8MT33 242 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 MTX2O75431 263 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 IGSF6O95976 241 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 CYBBP04839 570 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 SRCP12931 536 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 AQP4P55087 323 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 AP1S1P61966 158 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 STX5Q13190 355 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 MFSD4BQ5TF39 518 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.44
CIITA-212ENST00000618207 Q6ZVU0 165 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 KBTBD6Q86V97 674 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 SKA2Q8WVK7 121 aaPredicted RBP12.27□□□□□ -0.44
CIITA-212ENST00000618207 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.27□□□□□ -0.44
CIITA-212ENST00000618207 EGFL8Q99944 293 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 ECSITQ9BQ95 431 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 BBS2Q9BXC9 721 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 LRRC3Q9BY71 257 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 EBF3Q9H4W6 596 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 RETREG1Q9H6L5 497 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 POPDC3Q9HBV1 291 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 MAGEE1Q9HCI5 957 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.44
CIITA-212ENST00000618207 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 ZMYM5Q9UJ78 669 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 BLOC1S6Q9UL45 172 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 PCDHGA7Q9Y5G6 932 aa12.27□□□□□ -0.44
CIITA-212ENST00000618207 NOTCH4Q99466 2003 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 H3BNX3 289 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 PER2O15055 1255 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 NRP2O60462 931 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 ZNF821O75541 412 aaPredicted RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 ADH1AP07327 375 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 IMPDH2P12268 514 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 CLCN7P51798 805 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 KLC1Q07866 573 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 GALNT1Q10472 559 aaPredicted RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 NFATC2Q13469 925 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms