RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MED27Q6P2C8 311 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 SCIMPQ6UWF3 145 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 CREG2Q8IUH2 290 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 HERVK_113Q902F9 699 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 PLD4Q96BZ4 506 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 C1GALT1C1Q96EU7 318 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 CORO1CQ9ULV4 474 aaPredicted RBP11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 WFS1O76024 890 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 C2orf80Q0P641 193 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF433Q8N7K0 673 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 ANKFN1Q8N957 763 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 MFSD14AQ96MC6 490 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 CDH19Q9H159 772 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 hCG_1818297A0A087WSY0 165 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 SAGE2PA6NJ88 616 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 PTX3P26022 381 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 DCST1Q5T197 706 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 LCN9Q8WX39 176 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 PRICKLE1Q96MT3 831 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 GBA3Q9H227 469 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 DPEP2Q9H4A9 486 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 MED31Q9Y3C7 131 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 E9PAM4 449 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 AP5Z1O43299 807 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 B3GALT2O43825 422 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 ITPKAP23677 461 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 EPHA3P29320 983 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 ADGRG6Q86SQ4 1221 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 XPR1Q9UBH6 696 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 GRIP1Q9Y3R0 1128 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 HCN1O60741 890 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 PSMD10O75832 226 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 RPL22P35268 128 aaKnown RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 WNT3AP56704 352 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 HDDC3Q8N4P3 179 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 FAM124BQ9H5Z6 455 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 SHROOM3Q8TF72 1996 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 SLC30A4O14863 429 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 SYN3O14994 580 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 UGT2B4P06133 528 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 TAS2R50P59544 299 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 C11orf24Q96F05 449 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 STOML2Q9UJZ1 356 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 UNC5CO95185 931 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 METTL18O95568 372 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 GRK6P43250 576 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 TAF10Q12962 218 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 DUPD1Q68J44 220 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 CADM2Q8N3J6 435 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 OR2T12Q8NG77 320 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 HM13Q8TCT9 377 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 MAP4K5Q9Y4K4 846 aa11.08□□□□□ -0.64
CCDC144B-208ENST00000618081 WASHC1A8K0Z3 465 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 WASH3PC4AMC7 463 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 STK16O75716 305 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SEMA5AQ13591 1074 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SDHAF4Q5VUM1 108 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 WASH2PQ6VEQ5 465 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SYVN1Q86TM6 617 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 IFT80Q9P2H3 777 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 NOX1Q9Y5S8 564 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 PAPSS1O43252 624 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 OR4K2Q8NGD2 314 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 XAGE5Q8WWM1 108 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 PHF24Q9UPV7 400 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 DMTF1Q9Y222 760 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 ADAMDEC1O15204 470 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 ZMPSTE24O75844 475 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 POP4O95707 220 aaKnown RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 TNFSF9P41273 254 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 LIPEQ05469 1076 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 ABHD13Q7L211 337 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SAMD14Q8IZD0 417 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 SPATA6LQ8N4H0 392 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 VANGL1Q8TAA9 524 aaPredicted RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 EGFL7Q9UHF1 273 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 BCKDKO14874 412 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 CYP17A1P05093 508 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF823P16415 610 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 PTDSS1P48651 473 aaKnown RBP11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 NUDT4Q9NZJ9 180 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 STBD1O95210 358 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 THRBP10828 461 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 ANPEPP15144 967 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 IGFBP5P24593 272 aa11.07□□□□□ -0.64
CCDC144B-208ENST00000618081 DRG2P55039 364 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms