RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 RAB42Q8N4Z0 105 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 CAPNS2Q96L46 248 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 KCTD5Q9NXV2 234 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 YIPF1Q9Y548 306 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 MCM3APO60318 1980 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 DNAJA2O60884 412 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 RECQL5O94762 991 aaPredicted RBP13.9□□□□□ -0.18
SSBP2-220ENST00000615665 GPIP06744 558 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 GLYATQ6IB77 296 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ABCG8Q9H221 673 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 POPDC3Q9HBV1 291 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 NLE1Q9NVX2 485 aaPredicted RBP13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ADAMTS6Q9UKP5 1117 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 PPM1AP35813 382 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 GNPDA1P46926 289 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 STARD3Q14849 445 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ZNF789Q5FWF6 425 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 CCDC81Q6ZN84 652 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ZNF621Q6ZSS3 439 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 TMEM26Q6ZUK4 368 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 UTS2BQ765I0 119 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 PSKH2Q96QS6 385 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 OR52E6Q96RD3 313 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ZNF556Q9HAH1 456 aa13.9□□□□□ -0.18
SSBP2-220ENST00000615665 ZNF490Q9ULM2 529 aaPredicted RBP13.9□□□□□ -0.18
SSBP2-220ENST00000615665 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
SSBP2-220ENST00000615665 CATP04040 527 aaKnown RBP13.9□□□□□ -0.19
SSBP2-220ENST00000615665 SERPIND1P05546 499 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 LAG3P18627 525 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 GLDCP23378 1020 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.19
SSBP2-220ENST00000615665 CSKP41240 450 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 LRRC74AQ0VAA2 488 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 ACOX1Q15067 660 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 ADHFE1Q8IWW8 467 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 OR2T12Q8NG77 320 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 PALMDQ9NP74 551 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 SH3BP4Q9P0V3 963 aa13.9□□□□□ -0.19
SSBP2-220ENST00000615665 ENPP3O14638 875 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 KPNA5O15131 536 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 STK16O75716 305 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 WDR47O94967 919 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CD1DP15813 335 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 SERPINB10P48595 397 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 ERVK-8P63133 956 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 IL5RAQ01344 420 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 UBE2R2Q712K3 238 aaPredicted RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 DACH2Q96NX9 599 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 KCNA7Q96RP8 456 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 GALPQ9UBC7 116 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 GIMAP2Q9UG22 337 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 TPGS2Q68CL5 300 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CHST9Q7L1S5 443 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 ATG16L2Q8NAA4 619 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 NRG4Q8WWG1 115 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 LZICQ8WZA0 190 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 BBS2Q9BXC9 721 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 LRTM1Q9HBL6 345 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 DMTF1Q9Y222 760 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CNTRLQ7Z7A1 2325 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 KPNA3O00505 521 aaPredicted RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 GALTP07902 379 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 RHDQ02161 417 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 LYSMD3Q7Z3D4 306 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 ARHGAP22Q7Z5H3 698 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 DNAJB7Q7Z6W7 309 aaPredicted RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 PNPLA1Q8N8W4 532 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CENPNQ96H22 339 aaPredicted RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 MEAF6Q9HAF1 191 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 IGSF5Q9NSI5 407 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
SSBP2-220ENST00000615665 CNOT6Q9ULM6 557 aaKnown RBP13.89□□□□□ -0.19
SSBP2-220ENST00000615665 M0R3G1 203 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 MT-ND1P03886 318 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 UGT2B4P06133 528 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ADH1AP07327 375 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 COX7A2P14406 83 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 ADAM17P78536 824 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 NAT14Q8WUY8 206 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 EEF1AKMT1Q8WVE0 214 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CANT1Q8WVQ1 401 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 CDK15Q96Q40 435 aa13.88□□□□□ -0.19
SSBP2-220ENST00000615665 TSEN34Q9BSV6 310 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms