RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PCDHGA3Q9Y5H0 932 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
FOXN3-219ENST00000615335 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 PRSS51A0A1B0GVH4 220 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 F5H5T6 163 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 LEFTY2O00292 366 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SCO2O43819 266 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 NUAK1O60285 661 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 CLPXO76031 633 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ALX3O95076 343 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 TACR2P21452 398 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 IST1P53990 364 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 TPTEP56180 551 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 FGD3Q5JSP0 725 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ADGRF1Q5T601 910 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ZSCAN18Q8TBC5 510 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SH3RF2Q8TEC5 729 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 USP13Q92995 863 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ANKRD60Q9BZ19 345 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 TBC1D14Q9P2M4 693 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 PRUNE2Q8WUY3 3088 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 NUP205Q92621 2012 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ICMTO60725 284 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF26P17031 533 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 GABRB3P28472 473 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SLC6A4P31645 630 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 HTR7P34969 479 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 GNG2P59768 71 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 NRG1Q02297 640 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 FLOT2Q14254 428 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 ATG14Q6ZNE5 492 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 NEK10Q6ZWH5 1172 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 LGI2Q8N0V4 545 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 FGF13Q92913 245 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SHCBP1LQ9BZQ2 653 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
FOXN3-219ENST00000615335 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
FOXN3-219ENST00000615335 HELZP42694 1942 aaKnown RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 C1orf232A0A0U1RR37 186 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 DCLK1O15075 740 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 PRAMEF12O95522 483 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 BCL10O95999 233 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 NCF2P19878 526 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ETV3P41162 512 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 NFATC3Q12968 1075 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 GALNT18Q6P9A2 607 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 HTR3DQ70Z44 454 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 TAS2R42Q7RTR8 314 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 GALNT13Q8IUC8 556 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CACTIN-AS1Q8N1I8 211 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CFAP52Q8N1V2 620 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 DCLK2Q8N568 766 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 TANKQ92844 425 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 IGSF8Q969P0 613 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ACDQ96AP0 544 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 RMDN1Q96DB5 314 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 DHRS9Q9BPW9 319 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 TUBA1CQ9BQE3 449 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 NPLQ9BXD5 320 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 HMG20AQ9NP66 347 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 THG1LQ9NWX6 298 aaKnown RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 NEU3Q9UQ49 428 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF195O14628 629 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 GREM1O60565 184 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 TSPAN3O60637 253 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CCNA2P20248 432 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CXCR2P25025 360 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ARRB2P32121 409 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 SPRP35270 261 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 LTBRP36941 435 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 GMPRP36959 345 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 STX1BP61266 288 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 MRPS22P82650 360 aaKnown RBP12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 VWA5B1Q5TIE3 1220 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 CMC1Q7Z7K0 106 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 AKAP14Q86UN6 197 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 LILRA2Q8N149 483 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 TTC30BQ8N4P2 665 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 OR52K1Q8NGK4 314 aa12.97□□□□□ -0.33
FOXN3-219ENST00000615335 ZNF669Q96BR6 464 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms