RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 COMMD2Q86X83 199 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SIAH1Q8IUQ4 282 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SMG8Q8ND04 991 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 HM13Q8TCT9 377 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 TCP10LQ8TDR4 215 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 FIG4Q92562 907 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 USP6NLQ92738 828 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 RBM18Q96H35 190 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 TEKT5Q96M29 485 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 CATSPER2Q96P56 530 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SPATA9Q9BWV2 254 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 OR2AG1Q9H205 316 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 CCSER2Q9H7U1 834 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 B3GAT2Q9NPZ5 323 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 POLR3BQ9NW08 1133 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 PHF11Q9UIL8 331 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 PIAS3Q9Y6X2 628 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MBLAC1A4D2B0 266 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SAC3D1A6NKF1 404 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 DNAJA2O60884 412 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 LRCH4O75427 683 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 ENDOUP21128 410 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 UGT1A5P35504 534 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 CDKN2BP42772 138 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 KHKP50053 298 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MANFP55145 182 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 AP1S2P56377 157 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SERINC3Q13530 473 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 TCHHL1Q5QJ38 904 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MBOAT1Q6ZNC8 495 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 PPP1R14AQ96A00 147 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 OGDHLQ9ULD0 1010 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 PCDHGA11Q9Y5H2 935 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MRPL42Q9Y6G3 142 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 ATXN2Q99700 1313 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 IGKV6-21A0A0C4DH24 114 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MAT2AP31153 395 aaKnown RBP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 HEPACAMQ14CZ8 416 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 DEPDC1Q5TB30 811 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SLC39A11Q8N1S5 342 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 ATG16L2Q8NAA4 619 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 MYH3P11055 1940 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 CA3P07451 260 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 NT5EP21589 574 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 SSTR1P30872 391 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 TOP3AQ13472 1001 aaPredicted RBP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 SCUBE1Q8IWY4 988 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 ANKRD7Q92527 254 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLEKHG4BQ96PX9 1271 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRIB3Q96RU7 358 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PELOQ9BRX2 385 aaKnown RBP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 EFCAB11Q9BUY7 163 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 REEP1Q9H902 201 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 THSD7AQ9UPZ6 1657 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 FAM234BA2RU67 622 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 C2orf74A8MZ97 194 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 H7C0S8 307 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 M0QZQ0 153 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PHGDHO43175 533 aaKnown RBP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PIGNO95427 931 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRPS2P11908 318 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 ADSSP30520 456 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 HNRNPKP61978 463 aaKnown RBP eCLIP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLGLB1Q02325 96 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 FGL2Q14314 439 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 PCDHB18PQ96TA0 734 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 EBF3Q9H4W6 596 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 LYARQ9NX58 379 aaKnown RBP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 ANAPC2Q9UJX6 822 aa9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 RUVBL1Q9Y265 456 aaKnown RBP9.65□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITGB4P16144 1822 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 E2F3O00716 465 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 GOT2P00505 430 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 ATP1B2P14415 290 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 ATP6V1B2P21281 511 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SDHBP21912 280 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 RABGGTBP53611 331 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 RNF145Q96MT1 663 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 PCYT2Q99447 389 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SNX15Q9NRS6 342 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 OBP2AQ9NY56 170 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 CYP8B1Q9UNU6 501 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 GJB5O95377 273 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 MYL12AP19105 171 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 NOVP48745 357 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 MAPKAPK3Q16644 382 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 PDK4Q16654 411 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 FBXL22Q6P050 247 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 DUSP23Q9BVJ7 150 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 MVB12BQ9H7P6 319 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 USP29Q9HBJ7 922 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 CD84Q9UIB8 345 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 GPR34Q9UPC5 381 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms