RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 HADHAP40939 763 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 ARSDP51689 593 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CCL7P80098 99 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 INSCQ1MX18 579 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 LDLRAP1Q5SW96 308 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 SLC37A2Q8TED4 501 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 ZNF778Q96MU6 729 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 OSGEPL1Q9H4B0 414 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 PRDM8Q9NQV8 689 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 NLE1Q9NVX2 485 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 A6NCN8 305 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 MROH6A6NGR9 719 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 AGAP14A8MT82 685 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 KMOO15229 486 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 PPM1DO15297 605 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 NUDT21O43809 227 aaKnown RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 KRT14P02533 472 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 RPLP0P05388 317 aaKnown RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 ZNF7P17097 686 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 SGF29Q96ES7 293 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CDKN2AIPNLQ96HQ2 116 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CAPZA3Q96KX2 299 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 NAP1L3Q99457 506 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-211ENST00000615061 SLC2A6Q9UGQ3 507 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 CRLS1Q9UJA2 301 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 KMT2BQ9UMN6 2715 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 OR51F1A6NGY5 319 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 CES2O00748 559 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 CSO75390 466 aaKnown RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 AKT1P31749 480 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 PDX1P52945 283 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 CRADDP78560 199 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 B4GALNT1Q00973 533 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 GPS1Q13098 491 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 GTF2H3Q13889 308 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 TMEM220Q6QAJ8 160 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SPRED1Q7Z699 444 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 ZNF761Q86XN6 746 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 CCNJLQ8IV13 435 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SFRP1Q8N474 314 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 OR6C4Q8NGE1 309 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 OR13J1Q8NGT2 312 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 STYXQ8WUJ0 223 aa16.48■□□□□ 0.23
CBWD3-211ENST00000615061 EIF2B3Q9NR50 452 aaKnown RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 SCHIP1Q9P0W5 487 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 ATXN7L1Q9ULK2 861 aaPredicted RBP16.48■□□□□ 0.23
CBWD3-211ENST00000615061 AHCTF1Q8WYP5 2266 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 H7C0S8 307 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 NTN3O00634 580 aaPredicted RBP16.47■□□□□ 0.23
CBWD3-211ENST00000615061 PHF2O75151 1096 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 TCP1P17987 556 aaKnown RBP16.47■□□□□ 0.23
CBWD3-211ENST00000615061 MSH3P20585 1137 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 ITGALP20701 1170 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 RPL10P27635 214 aaKnown RBP16.47■□□□□ 0.23
CBWD3-211ENST00000615061 OR1D5P58170 312 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 SPIDRQ14159 915 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 ZRANB3Q5FWF4 1079 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 PAPD7Q5XG87 772 aaKnown RBP16.47■□□□□ 0.23
CBWD3-211ENST00000615061 IYDQ6PHW0 289 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 ZNF534Q76KX8 674 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 PIANPQ8IYJ0 282 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 NXPE1Q8N323 547 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 NAPGQ99747 312 aaPredicted RBP16.47■□□□□ 0.23
CBWD3-211ENST00000615061 C19orf43Q9BQ61 176 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 LRRN3Q9H3W5 708 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 NEU2Q9Y3R4 380 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 SLC30A1Q9Y6M5 507 aa16.47■□□□□ 0.23
CBWD3-211ENST00000615061 PRR19A6NJB7 356 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 RHPN2P1A8MT19 583 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 B4GAT1O43505 415 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 F3P13726 295 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 ALDH4A1P30038 563 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 DRG2P55039 364 aaKnown RBP16.46■□□□□ 0.23
CBWD3-211ENST00000615061 ISXQ2M1V0 245 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 FNBP1LQ5T0N5 605 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 ANKRD22Q5VYY1 191 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 C4orf22Q6V702 233 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 RBM44Q6ZP01 1051 aaKnown RBP16.46■□□□□ 0.23
CBWD3-211ENST00000615061 TMPRSS9Q7Z410 1059 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 ZNF438Q7Z4V0 828 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 B3GNT8Q7Z7M8 397 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 CREG2Q8IUH2 290 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 TIMM29Q9BSF4 260 aa16.46■□□□□ 0.23
CBWD3-211ENST00000615061 ZCCHC2Q9C0B9 1178 aaKnown RBP16.46■□□□□ 0.23
CBWD3-211ENST00000615061 HEATR9A2RTY3 570 aa16.46■□□□□ 0.22
CBWD3-211ENST00000615061 CCDC162PA2VCL2 907 aa16.46■□□□□ 0.22
CBWD3-211ENST00000615061 SGTAO43765 313 aa16.46■□□□□ 0.22
CBWD3-211ENST00000615061 POP7O75817 140 aaKnown RBP16.46■□□□□ 0.22
CBWD3-211ENST00000615061 GAS8O95995 478 aa16.46■□□□□ 0.22
CBWD3-211ENST00000615061 CAPNS1P04632 268 aa16.46■□□□□ 0.22
CBWD3-211ENST00000615061 PROS1P07225 676 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms