RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PREPP48147 710 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 GFERP55789 205 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 RALGPS1Q5JS13 557 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TRAPPC5Q8IUR0 188 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TMEM151BQ8IW70 566 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CCHCR1Q8TD31 782 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 SCARF2Q96GP6 870 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 PRR11Q96HE9 360 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 OR2M4Q96R27 311 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CDC6Q99741 560 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TSGA10Q9BZW7 698 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 CARD9Q9H257 536 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ASB8Q9H765 288 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 PKD2L2Q9NZM6 624 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 GALPQ9UBC7 116 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TEX51A0A1B0GUA7 166 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NEMP2A6NFY4 417 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 SRRM3A6NNA2 597 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 SRP72O76094 671 aaKnown RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 POLBP06746 335 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 MC4RP32245 332 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NUDT1P36639 197 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 MAPK9P45984 424 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 SUOXP51687 545 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 C16orf72Q14CZ0 275 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ELOCQ15369 112 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 UBAP2Q5T6F2 1119 aaKnown RBP5.62□□□□□ -1.51
CPNE3-208ENST00000614678 FAM20CQ8IXL6 584 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 ARL10Q8N8L6 244 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TRIM58Q8NG06 486 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TRIM51Q9BSJ1 452 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 TRHDEQ9UKU6 1024 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NEU2Q9Y3R4 380 aa5.62□□□□□ -1.51
CPNE3-208ENST00000614678 NBASA2RRP1 2371 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC162PA2VCL2 907 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GOLGA6L6A8MZA4 724 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 H3BM21 787 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 STX7O15400 261 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 MAGEC1O60732 1142 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 AP2A1O95782 977 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 MGAT1P26572 445 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 SLC19A1P41440 591 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GNG11P61952 73 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 PARP6Q2NL67 630 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 MSS51Q4VC12 460 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TMEM220Q6QAJ8 160 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 BZW1Q7L1Q6 419 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 SPRED1Q7Z699 444 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GALNT13Q8IUC8 556 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 FAM181AQ8N9Y4 354 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 PHC3Q8NDX5 983 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ZCCHC14Q8WYQ9 949 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 HDAC10Q969S8 669 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 WDR83Q9BRX9 315 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 APMAPQ9HDC9 416 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 SYBUQ9NX95 663 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 AK5Q9Y6K8 562 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CFAP69A5D8W1 941 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GOLGA6L9A6NEM1 432 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CHUKO15111 745 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TP73O15350 636 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 DFNA5O60443 496 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CD1CP29017 333 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GEMP55040 296 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 RPL26P61254 145 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 NR0B2Q15466 257 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 INSCQ1MX18 579 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ISXQ2M1V0 245 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF662Q6ZS27 426 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 GSTA5Q7RTV2 222 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CAND1Q86VP6 1230 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 DCP2Q8IU60 420 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 VRK3Q8IV63 474 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 IGDCC3Q8IVU1 814 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 KLHL7Q8IXQ5 586 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 KRT222Q8N1A0 295 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TRAM1L1Q8N609 369 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 DNAAF3Q8N9W5 541 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ZNF398Q8TD17 642 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 RSC1A1Q92681 617 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 RTP4Q96DX8 246 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CDKN2AIPNLQ96HQ2 116 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 FCRL3Q96P31 734 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 ALS2CR12Q96Q35 445 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CTRCQ99895 268 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 KLHL25Q9H0H3 589 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TRIM39Q9HCM9 518 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 OGFRQ9NZT2 677 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 RPL26L1Q9UNX3 145 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 TLN1Q9Y490 2541 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 POP7O75817 140 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 CTSBP07858 339 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 HLA-DPA1P20036 260 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 SPAM1P38567 509 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 LEPRP48357 1165 aaKnown RBP5.61□□□□□ -1.51
CPNE3-208ENST00000614678 FOXL2P58012 376 aa5.61□□□□□ -1.51
CPNE3-208ENST00000614678 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms