RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ITGB8P26012 769 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 RPL14P50914 215 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 SMAD3P84022 425 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 RAB39AQ14964 217 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 FAM83EQ2M2I3 478 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 GPR158Q5T848 1215 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 TXNDC8Q6A555 127 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM207Q6UWW9 146 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 LSMEM2Q8N112 164 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 GABPB2Q8TAK5 448 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 BRSK1Q8TDC3 778 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 MRPL57Q9BQC6 102 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 DUS2Q9NX74 493 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 NCKIPSDQ9NZQ3 722 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 FIS1Q9Y3D6 152 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KIAA0100Q14667 2235 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CDH23Q9H251 3354 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 A0A1B0GVM2 712 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 TCAF2A6NFQ2 919 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 CD3EAPO15446 510 aaKnown RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 URODP06132 367 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ARSAP15289 507 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 HDCP19113 662 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 CLCN2P51788 898 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 TPGS2Q68CL5 300 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ANKRD26P1Q6NSI1 321 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 HMBOX1Q6NT76 420 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 GK5Q6ZS86 529 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM150AQ86TG1 271 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ARL14EPQ8N8R7 260 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 RP9Q8TA86 221 aaKnown RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 HM13Q8TCT9 377 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 HPS1Q92902 700 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 PHF21BQ96EK2 531 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 NPLQ9BXD5 320 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF334Q9HCZ1 680 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 SCUBE2Q9NQ36 999 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF839A8K0R7 811 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 INSIG1O15503 277 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 AKAP10O43572 662 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 NDST3O95803 873 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 CSF2RAP15509 400 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ZXDBP98169 803 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 DMPKQ09013 629 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 FAM219BQ5XKK7 198 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 CXorf57Q6NSI4 855 aaKnown RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 BTLAQ7Z6A9 289 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 RYBPQ8N488 228 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-208ENST00000613073 TOX2Q96NM4 488 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 TRIB3Q96RU7 358 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 NDEL1Q9GZM8 345 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 SAGE1Q9NXZ1 904 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 DAPK2Q9UIK4 370 aa16.35■□□□□ 0.21
CNOT3-208ENST00000613073 ILVBLA1L0T0 632 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 H0Y626 953 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 TBL1XO60907 577 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 EPOP01588 193 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 INHBBP09529 407 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 LTA4HP09960 611 aaKnown RBP16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ACRP10323 421 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 MAP4P27816 1152 aaKnown RBP16.34■□□□□ 0.21
CNOT3-208ENST00000613073 MZF1P28698 734 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-208ENST00000613073 BCL2A1Q16548 175 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 AGAP9Q5VTM2 703 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 CHSY3Q70JA7 882 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 LPCAT1Q8NF37 534 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 STARD8Q92502 1023 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 CEP295NLQ96MC4 621 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SMOXQ9NWM0 555 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SUN2Q9UH99 717 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ITGB1BP2Q9UKP3 347 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ST14Q9Y5Y6 855 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 E7ENX8 843 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SULT1C4O75897 302 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 NR4A1P22736 598 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ARF5P84085 180 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 TECRLQ5HYJ1 363 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 PITRM1Q5JRX3 1037 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 CYGBQ8WWM9 190 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 LPGAT1Q92604 370 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SLCO4A1Q96BD0 722 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-208ENST00000613073 FBXL20Q96IG2 436 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ZBED2Q9BTP6 218 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ANKRD60Q9BZ19 345 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 ALG9Q9H6U8 611 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 EFCAB1Q9HAE3 211 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 SIAEQ9HAT2 523 aa16.34■□□□□ 0.21
CNOT3-208ENST00000613073 HDAC3O15379 428 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 GRID2O43424 1007 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 RPP40O75818 363 aaKnown RBP16.33■□□□□ 0.21
CNOT3-208ENST00000613073 PRKAA1Q13131 559 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF549Q6P9A3 640 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.21
CNOT3-208ENST00000613073 OR4K2Q8NGD2 314 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms