RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MAPRE1Q15691 268 aaKnown RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 USP41Q3LFD5 358 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 ZBED5Q49AG3 693 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 CYBRD1Q53TN4 286 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 FRA10AC1Q70Z53 315 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 GPSM1Q86YR5 675 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 ATP6V0D2Q8N8Y2 350 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 MDGA1Q8NFP4 955 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 AURKBQ96GD4 344 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 TRMT6Q9UJA5 497 aaKnown RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 AQP12BA6NM10 295 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SLC2A4P14672 509 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 MATN1P21941 496 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 HOXC13P31276 330 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 MC4RP32245 332 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 HK3P52790 923 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 DUSP4Q13115 394 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SERINC3Q13530 473 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 EIF4EBP2Q13542 120 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SLC36A3Q495N2 470 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 C6orf136Q5SQH8 315 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 AQP12AQ8IXF9 295 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 MINDY1Q8N5J2 469 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 BRSK1Q8TDC3 778 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 GKN1Q9NS71 199 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SMPD4Q9NXE4 827 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 FAM8A1Q9UBU6 413 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 LIMD1Q9UGP4 676 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 MED16Q9Y2X0 877 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 ZBBXA8MT70 800 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 GSTA4O15217 222 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TLR5O60602 858 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 CAPNS1P04632 268 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 UGT1A1P22309 533 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 UGT1A4P22310 534 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SHMT2P34897 504 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 UGT1A3P35503 534 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 UGT1A5P35504 534 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 CAPGP40121 348 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 GATMP50440 423 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SLC44A4Q53GD3 710 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SETMARQ53H47 684 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TMTC4Q5T4D3 741 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SPRYD7Q5W111 196 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 ELMSAN1Q6PJG2 1045 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 DENND1CQ8IV53 801 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 HM13Q8TCT9 377 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TMBIM1Q969X1 311 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TMEM165Q9HC07 324 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TSC2P49815 1807 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 PDCD11Q14690 1871 aaKnown RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 A0A0U1RQF3 1178 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 NOL3O60936 208 aaKnown RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 NUP107P57740 925 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 GTDC1Q4AE62 458 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 SPESP1Q6UW49 350 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 GPRIN3Q6ZVF9 776 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 PHACTR4Q8IZ21 702 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TRPV1Q8NER1 839 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 OR10A6Q8NH74 314 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 ITFG1Q8TB96 612 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 EGFL8Q99944 293 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 FARSBQ9NSD9 589 aaKnown RBP13.91□□□□□ -0.18
COL6A1-207ENST00000612273 TMEM248Q9NWD8 314 aa13.91□□□□□ -0.18
COL6A1-207ENST00000612273 LOC285095A0A1B0GVY8 99 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 BBIP1A8MTZ0 92 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 DFNA5O60443 496 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 KERAO60938 352 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 XYLBO75191 536 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 E2F6O75461 281 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 B3GALT4O96024 378 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 MYF6P23409 242 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 HRH2P25021 359 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 ERVPABLB-1P60509 514 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 RPL38P63173 70 aaKnown RBP13.9□□□□□ -0.18
COL6A1-207ENST00000612273 BNIP2Q12982 314 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 RFTN2Q52LD8 501 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-207ENST00000612273 AFMIDQ63HM1 303 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 LCN8Q6JVE9 175 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 BORAQ6PGQ7 559 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 ENPP6Q6UWR7 440 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 SLC22A15Q8IZD6 547 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 PROKR1Q8TCW9 393 aa13.9□□□□□ -0.18
COL6A1-207ENST00000612273 GFM2Q969S9 779 aaKnown RBP13.9□□□□□ -0.18
COL6A1-207ENST00000612273 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms