RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 CTPS1P17812 591 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
LINC00116-203ENST00000611969 MMP13P45452 471 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 CCL11P51671 97 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 LAMB3Q13751 1172 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
LINC00116-203ENST00000611969 NR6A1Q15406 480 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 UGT8Q16880 541 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 SLC6A19Q695T7 634 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 TXNRD3NBQ6F5E7 133 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 TIGD7Q6NT04 549 aaPredicted RBP13.56□□□□□ -0.24
LINC00116-203ENST00000611969 CHST15Q7LFX5 561 aaPredicted RBP13.56□□□□□ -0.24
LINC00116-203ENST00000611969 PLXDC1Q8IUK5 500 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 PGBD5Q8N414 524 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 TEX26Q8N6G2 289 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 AP2M1Q96CW1 435 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 C19orf60Q96EN9 201 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 SCRN2Q96FV2 425 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 COX14Q96I36 57 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 BTBD6Q96KE9 485 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 TGM7Q96PF1 710 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 TSGA13Q96PP4 275 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 DNAJC7Q99615 494 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 SLC29A3Q9BZD2 475 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 STN1Q9H668 368 aaKnown RBP13.56□□□□□ -0.24
LINC00116-203ENST00000611969 LHX9Q9NQ69 397 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 PPIL1Q9Y3C6 166 aa13.56□□□□□ -0.24
LINC00116-203ENST00000611969 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 MATN3O15232 486 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
LINC00116-203ENST00000611969 AKR1B10O60218 316 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 SNX2O60749 519 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 SPAG6O75602 509 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 RECKO95980 971 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 F3P13726 295 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 TYRP1P17643 537 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 MX2P20592 715 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 CCNCP24863 283 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 ARSEP51690 589 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 UBE2IP63279 158 aaKnown RBP13.55□□□□□ -0.24
LINC00116-203ENST00000611969 IFI16Q16666 785 aaKnown RBP13.55□□□□□ -0.24
LINC00116-203ENST00000611969 ASTE1Q2TB18 679 aaPredicted RBP13.55□□□□□ -0.24
LINC00116-203ENST00000611969 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 SLC9B2Q86UD5 537 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 SH3KBP1Q96B97 665 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
LINC00116-203ENST00000611969 ZNF670Q9BS34 389 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 CPNE7Q9UBL6 633 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 PADI1Q9ULC6 663 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 SLC30A1Q9Y6M5 507 aa13.55□□□□□ -0.24
LINC00116-203ENST00000611969 C21orf140B9A014 251 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ASMTLO95671 621 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 FGF5P12034 268 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 PTGIRP43119 386 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 GALNT2Q10471 571 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 DPYSL3Q14195 570 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 IL11RAQ14626 422 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ARMC12Q5T9G4 340 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 FAM199XQ6PEV8 388 aaPredicted RBP13.54□□□□□ -0.24
LINC00116-203ENST00000611969 USP45Q70EL2 814 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 NLRP8Q86W28 1048 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 RAVER1Q8IY67 606 aaKnown RBP13.54□□□□□ -0.24
LINC00116-203ENST00000611969 RBMXL3Q8N7X1 1067 aaKnown RBP13.54□□□□□ -0.24
LINC00116-203ENST00000611969 C5orf34Q96MH7 638 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 HERPUD2Q9BSE4 406 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.54□□□□□ -0.24
LINC00116-203ENST00000611969 POLR1EQ9GZS1 481 aaKnown RBP13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ING2Q9H160 280 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 SLAMF7Q9NQ25 335 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 SLC5A6Q9Y289 635 aa13.54□□□□□ -0.24
LINC00116-203ENST00000611969 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 ZNF487B1APH4 448 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 RASSF9O75901 435 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 PGLSO95336 258 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 CCNYL3P0C7X3 344 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 CA4P22748 312 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 MAXP61244 160 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 PPP1CAP62136 330 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00116-203ENST00000611969 VSIG1Q86XK7 387 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 THAP4Q8WY91 577 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 MAML1Q92585 1016 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 RSC1A1Q92681 617 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 MARVELD3Q96A59 401 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
LINC00116-203ENST00000611969 PLEKHG4BQ96PX9 1271 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms