RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ELP6Q0PNE2 266 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 FZD5Q13467 585 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CSHL1Q14406 222 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ANGPT1Q15389 498 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 PDK4Q16654 411 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 INSCQ1MX18 579 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 GPR33Q49SQ1 333 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 TMEM52BQ4KMG9 183 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 SETMARQ53H47 684 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ZNF648Q5T619 568 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 HENMT1Q5T8I9 393 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 LYPLAL1Q5VWZ2 237 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 LRRC8EQ6NSJ5 796 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CERS6Q6ZMG9 384 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 TRMT11Q7Z4G4 463 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 LRRC34Q8IZ02 419 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 MAML2Q8IZL2 1156 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 RBFAQ8N0V3 343 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CNPY4Q8N129 248 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CXorf40AQ8TE69 158 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 HEXDCQ8WVB3 486 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ANKRD49Q8WVL7 239 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 SCG3Q8WXD2 468 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ATOH1Q92858 354 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 NUS1Q96E22 293 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 DTD2Q96FN9 168 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 SHDQ96IW2 340 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 MAGEB18Q96M61 343 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 TSNARE1Q96NA8 513 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 GPR78Q96P69 363 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ZNF317Q96PQ6 595 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 GPR21Q99679 349 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 SLC30A3Q99726 388 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 USB1Q9BQ65 265 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 MKRN2Q9H000 416 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CLPBQ9H078 707 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 P2RY12Q9H244 342 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CCDC134Q9H6E4 229 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 CD248Q9HCU0 757 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 SARS2Q9NP81 518 aaKnown RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 IGSF5Q9NSI5 407 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ZDHHC3Q9NYG2 299 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.01□□□□□ -1.13
TARDBP-213ENST00000611963 DCDC2Q9UHG0 476 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 MED16Q9Y2X0 877 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 ACOT9Q9Y305 439 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 FADS3Q9Y5Q0 445 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 USP34Q70CQ2 3546 aa8.01□□□□□ -1.13
TARDBP-213ENST00000611963 VPS13AQ96RL7 3174 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 GMNCA6NCL1 334 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PRR23AA6NEV1 266 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 IGLON5A6NGN9 336 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 FAM170BA6NMN3 283 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 A6NNZ2 444 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PROB1E7EW31 1015 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 K7ESM1 405 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PSMD11O00231 422 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 MTX2O75431 263 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 RNASEH2AO75792 299 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 RECQL5O94762 991 aaPredicted RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 KLHL2O95198 593 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PCDH8O95206 1070 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 ESR1P03372 595 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 BPGMP07738 259 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 VIMP08670 466 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 LTA4HP09960 611 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 NEFHP12036 1026 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 COL6A2P12110 1019 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 ZNF7P17097 686 aaPredicted RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 C5AR1P21730 350 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 DRD4P21917 467 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 RPS3P23396 243 aaKnown RBP eCLIP8□□□□□ -1.13
TARDBP-213ENST00000611963 ALDH3A1P30838 453 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 AKT1P31749 480 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PPARGP37231 505 aaPredicted RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 NBL1P41271 181 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 SUOXP51687 545 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 SF3A3Q12874 501 aaKnown RBP eCLIP8□□□□□ -1.13
TARDBP-213ENST00000611963 ITGA9Q13797 1035 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 CCINQ13939 588 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 UBXN2BQ14CS0 331 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PCLAFQ15004 111 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 ZNF284Q2VY69 593 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 TUBB8Q3ZCM7 444 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 KHDC1Q4VXA5 237 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 GPRC6AQ5T6X5 926 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 ZDHHC20Q5W0Z9 365 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 CES4AQ5XG92 561 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 SEL1L3Q68CR1 1132 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 PTRHD1Q6GMV3 140 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 PAQR3Q6TCH7 311 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 KIAA1324Q6UXG2 1013 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 KYAT3Q6YP21 454 aaKnown RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 Q6ZS52 159 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 DET1Q7L5Y6 550 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 TBC1D1Q86TI0 1168 aaPredicted RBP8□□□□□ -1.13
TARDBP-213ENST00000611963 TMPRSS6Q8IU80 811 aa8□□□□□ -1.13
TARDBP-213ENST00000611963 NUDCD3Q8IVD9 361 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms