RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	FAM220BP	B1ANY3	271 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	FAM25A	B3EWG3	89 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	FAM25C	B3EWG5	89 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	FAM25G	B3EWG6	89 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	IFRD1	O00458	451 aa	Predicted RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	PCDH8	O95206	1070 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	CORO1A	P31146	461 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	C1D	Q13901	141 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	FBXL22	Q6P050	247 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	PHACTR4	Q8IZ21	702 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	ARL10	Q8N8L6	244 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	ZFYVE1	Q9HBF4	777 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	DNAJB4	Q9UDY4	337 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	CDV3	Q9UKY7	258 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	MRPS7	Q9Y2R9	242 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	C10orf71	Q711Q0	1435 aa		13.73	□□□□□ -0.21
MUC1-223	ENST00000611571	BBIP1	A8MTZ0	92 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	SLC7A4	O43246	635 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	UGT2B4	P06133	528 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	KCNQ1	P51787	676 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	TP53BP2	Q13625	1128 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ANKS3	Q6ZW76	656 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	UBE2R2	Q712K3	238 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	NPW	Q8N729	165 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	NODAL	Q96S42	347 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ACBD6	Q9BR61	282 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	CNTN3	Q9P232	1028 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	KLHL3	Q9UH77	587 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	STK16	O75716	305 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	IMPDH1	P20839	514 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	WARS	P23381	471 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	IGFBP5	P24593	272 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	FMO3	P31513	532 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	AGTR2	P50052	363 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PIGF	Q07326	219 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	IKBKE	Q14164	716 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	DDI2	Q5TDH0	399 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ERAP2	Q6P179	960 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	AMER2	Q8N7J2	671 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PIK3C3	Q8NEB9	887 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	TMEM209	Q96SK2	561 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	MTERF1	Q99551	399 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	GNPTG	Q9UJJ9	305 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	VPS4A	Q9UN37	437 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	STBD1	O95210	358 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ASGR1	P07306	291 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	IL7R	P16871	459 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PLEKHM3	Q6ZWE6	761 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	SPNS2	Q8IVW8	549 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	LIX1	Q8N485	282 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	RAB42	Q8N4Z0	105 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PHF10	Q8WUB8	498 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	CDKN2AIPNL	Q96HQ2	116 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	TIMMDC1	Q9NPL8	285 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	RAPGEFL1	Q9UHV5	662 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ATP6V1H	Q9UI12	483 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	LYVE1	Q9Y5Y7	322 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	NWD2	Q9ULI1	1742 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	BCKDK	O14874	412 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	CAT	P04040	527 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PRKAR2A	P13861	404 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ZNF182	P17025	639 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	SPIB	Q01892	262 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	SIRPB2	Q5JXA9	342 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	GPR153	Q6NV75	609 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	ACVR1C	Q8NER5	493 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	STYX	Q8WUJ0	223 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	CENPI	Q92674	756 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	CHCHD6	Q9BRQ6	235 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	PDLIM7	Q9NR12	457 aa		13.72	□□□□□ -0.21
MUC1-223	ENST00000611571	KIAA0100	Q14667	2235 aa	Known RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	MTX2	O75431	263 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	TNFRSF21	O75509	655 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	BCAS2	O75934	225 aa	Predicted RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	RPL10	P27635	214 aa	Known RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	RFX4	Q33E94	735 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	ZNF57	Q68EA5	555 aa	Predicted RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	TIFAB	Q6ZNK6	161 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	CHSY3	Q70JA7	882 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	CAMKK1	Q8N5S9	505 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	C19orf18	Q8NEA5	215 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	HDHD2	Q9H0R4	259 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	KLHL1	Q9NR64	748 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	IFT80	Q9P2H3	777 aa	Predicted RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	ECI2	O75521	394 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	SLC35E2B	P0CK96	405 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	DDX5	P17844	614 aa	Known RBP	13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	CAPG	P40121	348 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	KIR3DL1	P43629	444 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	RPIA	P49247	311 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	GRB7	Q14451	532 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	MYLK3	Q32MK0	819 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	TXNDC11	Q6PKC3	985 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	AHI1	Q8N157	1196 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	PGBD3	Q8N328	593 aa		13.71	□□□□□ -0.21
MUC1-223	ENST00000611571	BRSK1	Q8TDC3	778 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms