RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TM6SF1Q9BZW5 370 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 RAD21L1Q9H4I0 556 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 CPSF2Q9P2I0 782 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 MORF4L1Q9UBU8 362 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 MAGED1Q9Y5V3 778 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 PTPRCP08575 1304 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 LNP1A1A4G5 178 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SRRM3A6NNA2 597 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ADAM20O43506 726 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 PMS2P2O95744 297 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 PRLRP16471 622 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 TRIM21P19474 475 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 S1PR1P21453 382 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 DSCR9P59020 149 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 BRWD1-AS2P59051 145 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ZXDBP98169 803 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 KRT33BQ14525 404 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 MVPQ14764 893 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SF3B4Q15427 424 aaKnown RBP eCLIP4.2□□□□□ -1.744e-11■■■■■ 38.3
SMCHD1-213ENST00000609587 MEP1AQ16819 746 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SYT16Q17RD7 645 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 KRTCAP3Q53RY4 240 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 GARNL3Q5VVW2 1013 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ZDHHC20Q5W0Z9 365 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 NAA16Q6N069 864 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 TPRG1Q6ZUI0 275 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ADGRA1Q86SQ6 560 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 RNF113BQ8IZP6 322 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SYT2Q8N9I0 419 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC38A9Q8NBW4 561 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 MCUQ8NE86 351 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 OR5R1Q8NH85 324 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SPATA22Q8NHS9 363 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC44A1Q8WWI5 657 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ABTB1Q969K4 478 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 PIGTQ969N2 578 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 MED30Q96HR3 178 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ADGRG7Q96K78 797 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 DACH2Q96NX9 599 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF385AQ96PM9 386 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 GCNAQ96QF7 691 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 APOL6Q9BWW8 343 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 MRPL1Q9BYD6 325 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 RTN4RQ9BZR6 473 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 KLHL4Q9C0H6 718 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 TRMT1Q9NXH9 659 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 MALT1Q9UDY8 824 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 NRBP1Q9UHY1 535 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 VDAC3Q9Y277 283 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM184BQ9Y519 407 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 PCDHGA5Q9Y5G8 931 aa4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 PDS5AQ29RF7 1337 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-213ENST00000609587 A0A0G2JPF8 293 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SYNDIG1LA6NDD5 238 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 HNRNPCL3B7ZW38 293 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ZBTB43O43298 467 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC28A2O43868 658 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF217O75362 1048 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 PAPSS2O95340 614 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 AFPP02771 609 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ADRB2P07550 413 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 HNRNPCL4P0DMR1 293 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 DAOP14920 347 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 IL11P20809 199 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 HRH2P25021 359 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 GNL1P36915 607 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 CXCL9Q07325 125 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC20A2Q08357 652 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 KIF5AQ12840 1032 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SNTA1Q13424 505 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 GRAPQ13588 217 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC39A14Q15043 492 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 TRNP1Q6NT89 227 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 Q6ZTC4 211 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 CEP97Q8IW35 865 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 MAP7D3Q8IWC1 876 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ODF3L1Q8IXM7 274 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 PM20D2Q8IYS1 436 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 MINDY1Q8N5J2 469 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 GCSAMQ8N6F7 178 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 AVL9Q8NBF6 648 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 LILRB1Q8NHL6 650 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SERINC2Q96SA4 455 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ABHD1Q96SE0 405 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 GFI1Q99684 422 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 MEIS3Q99687 375 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 HGH1Q9BTY7 390 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 GAREM1Q9H706 876 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 SLC35C2Q9NQQ7 365 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 MARCH4Q9P2E8 410 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 TSPYL4Q9UJ04 414 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 HACL1Q9UJ83 578 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 PPIEQ9UNP9 301 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 ZNF148Q9UQR1 794 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 B3GALT5Q9Y2C3 310 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 FAM169AQ9Y6X4 670 aa4.19□□□□□ -1.74
SMCHD1-213ENST00000609587 A0A0U1RQG5 324 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-213ENST00000609587 A6NL46 340 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms