RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 HPS6Q86YV9 775 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 RHOT1Q8IXI2 618 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 RSC1A1Q92681 617 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 MR1Q95460 341 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 LYSMD1Q96S90 227 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 ADGRE3Q9BY15 652 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 MFRPQ9BY79 579 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 RAD18Q9NS91 495 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 LUZP4Q9P127 313 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF624Q9P2J8 865 aaPredicted RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 FARSAQ9Y285 508 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 KLK3P07288 261 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 RARAP10276 462 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF7P17097 686 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 RPL10P27635 214 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 COL8A1P27658 744 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 SSR1P43307 286 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 ELOAQ14241 798 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 GPR18Q14330 331 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF648Q5T619 568 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 PWWP2BQ6NUJ5 590 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 JMJD6Q6NYC1 403 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 FAM199XQ6PEV8 388 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 ZSCAN5AQ9BUG6 496 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 WASH6PQ9NQA3 447 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 TRIM10Q9UDY6 481 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 AMACRQ9UHK6 382 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 CENPEQ02224 2701 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 CACNA1DQ01668 2161 aa17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 SPENQ96T58 3664 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-211ENST00000609024 MATN3O15232 486 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 CPNE3O75131 537 aaKnown RBP17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 TIAF1O95411 115 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 SLC4A1P02730 911 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 RNF224P0DH78 156 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 MYBL1P10243 752 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 GZMAP12544 262 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 IL1R2P27930 398 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 DCTP40126 519 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 GTF2H3Q13889 308 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 PIGHQ14442 188 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 PLCL1Q15111 1095 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 ASIC2Q16515 512 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 TTC30BQ8N4P2 665 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 C5orf34Q96MH7 638 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 ERGIC2Q96RQ1 377 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 WDR24Q96S15 920 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 TIMM29Q9BSF4 260 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 ZFYVE1Q9HBF4 777 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 EPHA6Q9UF33 1036 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 SNX7Q9UNH6 387 aa17.04■□□□□ 0.32
CHMP4A-211ENST00000609024 UBA6A0AVT1 1052 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 OR52A4PA6NMU1 304 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 ANKRD66B4E2M5 251 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 SCRG1O75711 98 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 FOLR1P15328 257 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 KCNAB1Q14722 419 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 IFI16Q16666 785 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 PRR30Q53SZ7 412 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 TMTC4Q5T4D3 741 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 ABRAXAS1Q6UWZ7 409 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 IRF2BP2Q7Z5L9 587 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 ADGRG6Q86SQ4 1221 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 GDAP1Q8TB36 358 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 TEKT4Q8WW24 435 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 GLYATL1Q969I3 302 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF514Q96K75 400 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 TTC25Q96NG3 672 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 RUFY1Q96T51 708 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 RAB33BQ9H082 229 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 MLXIPLQ9NP71 852 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 FGF21Q9NSA1 209 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 SLC23A2Q9UGH3 650 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 LIMA1Q9UHB6 759 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 MYO6Q9UM54 1294 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 ITPR2Q14571 2701 aa17.03■□□□□ 0.32
CHMP4A-211ENST00000609024 A6NL46 340 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 VEGFDO43915 354 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 TMEM63AO94886 807 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 CDK14O94921 469 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 EBLN1P0CF75 366 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 CCNCP24863 283 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 PTGIRP43119 386 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 IL10RAQ13651 578 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 QPCTQ16769 361 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 PDPK2PQ6A1A2 396 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 ALG1LQ6GMV1 187 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 KMT5CQ86Y97 462 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 TRAM1L1Q8N609 369 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 PNPLA2Q96AD5 504 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 HAUS4Q9H6D7 363 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 ADGRG1Q9Y653 693 aa17.02■□□□□ 0.32
CHMP4A-211ENST00000609024 IGHV5-51A0A0C4DH38 117 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms