RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 ABRAXAS1Q6UWZ7 409 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 RFX6Q8HWS3 928 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 OR8K1Q8NGG5 319 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 TADA1Q96BN2 335 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 DEF6Q9H4E7 631 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 ZNF71Q9NQZ8 489 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 SIDT1Q9NXL6 827 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 TMPRSS11EQ9UL52 423 aa13.18□□□□□ -0.3
POLR2J3-219ENST00000608621 PRR19A6NJB7 356 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 AURKAO14965 403 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 VEGFDO43915 354 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 AKR1B10O60218 316 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 PMPCBO75439 489 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 NDST3O95803 873 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 BRAFP15056 766 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 ZNF28P17035 718 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 TCN2P20062 427 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 IDSP22304 550 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 F8A1P23610 371 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 STAT5AP42229 794 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 DYNLT1P63172 113 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 SH3BP2P78314 561 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 MC1RQ01726 317 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 SEPT7Q16181 437 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 ESX1Q8N693 406 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 APOBEC4Q8WW27 367 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 STARD8Q92502 1023 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 OLFM3Q96PB7 478 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 TIMM29Q9BSF4 260 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 UBP1Q9NZI7 540 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 MRPS18BQ9Y676 258 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 RPS6KL1Q9Y6S9 549 aa13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-219ENST00000608621 BSNQ9UPA5 3926 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 SSU72P8A0A1W2PR75 194 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 TOX3O15405 576 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 KRT1P04264 644 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 TNNT1P13805 278 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 LEPRP48357 1165 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 DRG2P55039 364 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 TMEM115Q12893 351 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 MAP7Q14244 749 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 SLC14A2Q15849 920 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 COLEC12Q5KU26 742 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 ATP1A1-AS1Q5TC04 95 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 TEKT5Q96M29 485 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 OR6C1Q96RD1 312 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 CHP1Q99653 195 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 ULBP3Q9BZM4 244 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 EPN3Q9H201 632 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
POLR2J3-219ENST00000608621 A0A0A6YYK5 440 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 OR52A4PA6NMU1 304 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 RASSF9O75901 435 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 TPM3P06753 285 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 PTPN3P26045 913 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 DLSTP36957 453 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 GPR18Q14330 331 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 AGAP9Q5VTM2 703 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 WASH2PQ6VEQ5 465 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 C11orf96Q7Z7L8 435 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 RASGRP3Q8IV61 690 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 GALNT6Q8NCL4 622 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 RSC1A1Q92681 617 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 ELMO2Q96JJ3 720 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 VPS35Q96QK1 796 aa13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 ZNF768Q9H5H4 540 aaKnown RBP13.15□□□□□ -0.3
POLR2J3-219ENST00000608621 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms