RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 ATP6V1E1P36543 226 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 KCNJ4P48050 445 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 SCN1BQ07699 218 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 FAM27E3Q08E93 113 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 GRSF1Q12849 480 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00458-206ENST00000607494 ZNF674Q2M3X9 581 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 PQLC2Q6ZP29 291 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 RAPH1Q70E73 1250 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 TRILQ7L0X0 811 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 ADCK2Q7Z695 626 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 GPSM1Q86YR5 675 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 IQCF1Q8N6M8 205 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 CAMKVQ8NCB2 501 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 CFAP61Q8NHU2 1237 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 NUDCD2Q8WVJ2 157 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 SNX21Q969T3 373 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 ZNF333Q96JL9 665 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 CCDC114Q96M63 670 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 PCGF1Q9BSM1 259 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 TASP1Q9H6P5 420 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 SPAG4Q9NPE6 437 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 MDFICQ9P1T7 246 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 HACL1Q9UJ83 578 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 KNSTRNQ9Y448 316 aa5.48□□□□□ -1.53
LINC00458-206ENST00000607494 VCYO14598 125 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 SMAD9O15198 467 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 IPO8O15397 1037 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 RSL1D1O76021 490 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 RGS11O94810 467 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 PENKP01210 267 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 ENO3P13929 434 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 CHATP28329 748 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 HOXC9P31274 260 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 DCTDP32321 178 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 UBXN1Q04323 297 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 YWHAHQ04917 246 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 NFE2L1Q14494 772 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 ZNF273Q14593 569 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 PNLIPRP3Q17RR3 467 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 C6orf163Q5TEZ5 329 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 FAM43BQ6ZT52 329 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 LDB1Q86U70 411 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 ADIPOR2Q86V24 386 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 RBFAQ8N0V3 343 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 CCAR2Q8N163 923 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 NDUFAF2Q8N183 169 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 HORMAD2Q8N7B1 307 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 IQUBQ8NA54 791 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 RBM15BQ8NDT2 890 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 C7orf57Q8NEG2 295 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MOSPD2Q8NHP6 518 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 GRK7Q8WTQ7 553 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 KCNE4Q8WWG9 221 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 PTP4A1Q93096 173 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MR1Q95460 341 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MED30Q96HR3 178 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 CCDC43Q96MW1 224 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MEIS3Q99687 375 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 MGME1Q9BQP7 344 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 LHPPQ9H008 270 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 KCNK15Q9H427 330 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 EPB41L5Q9HCM4 733 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 PIH1D3Q9NQM4 214 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 HIF1ANQ9NWT6 349 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 CHCHD3Q9NX63 227 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 DDX43Q9NXZ2 648 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 UBA2Q9UBT2 640 aaPredicted RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 IL17BQ9UHF5 180 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 LIPGQ9Y5X9 500 aa5.47□□□□□ -1.53
LINC00458-206ENST00000607494 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.47□□□□□ -1.53
LINC00458-206ENST00000607494 GTPBP10A4D1E9 387 aaKnown RBP5.46□□□□□ -1.54
LINC00458-206ENST00000607494 OR6C76A6NM76 312 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 CCDC188H7C350 402 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 MDM4O15151 490 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 CLDN7O95471 211 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 ACAA1P09110 424 aaPredicted RBP5.46□□□□□ -1.54
LINC00458-206ENST00000607494 GJA1P17302 382 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 TNFSF8P32971 234 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 CLK1P49759 484 aaKnown RBP5.46□□□□□ -1.54
LINC00458-206ENST00000607494 ALDH3A2P51648 485 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 BMXP51813 675 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 CAPZA1P52907 286 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SIRPAP78324 504 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 LTBQ06643 244 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SREBF2Q12772 1141 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 TUBB2AQ13885 445 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 NFATC4Q14934 902 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SIGIRRQ6IA17 410 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 Q6ZTK2 550 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 MSANTD1Q6ZTZ1 278 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 HAUS6Q7Z4H7 955 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SFTPA2Q8IWL1 248 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 SCCPDHQ8NBX0 429 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 OR8H1Q8NGG4 311 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 DACH2Q96NX9 599 aa5.46□□□□□ -1.54
LINC00458-206ENST00000607494 FERMT1Q9BQL6 677 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms