RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 TSGA10Q9BZW7 698 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 STRADBQ9C0K7 418 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 AAR2Q9Y312 384 aaKnown RBP12.12□□□□□ -0.47
CTSA-210ENST00000606000 PKP3Q9Y446 797 aa12.12□□□□□ -0.47
CTSA-210ENST00000606000 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 PRR19A6NJB7 356 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 OR2AG2A6NM03 316 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 HAX1O00165 279 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 KMOO15229 486 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 STX7O15400 261 aaKnown RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 KLK10O43240 276 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 KRT86O43790 486 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 VEGFDO43915 354 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 PRAMEF1O95521 474 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 ITGA2BP08514 1039 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 JMJD7P0C870 316 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 CCL4P13236 92 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 BRAFP15056 766 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 RPL10P27635 214 aaKnown RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 PBLDP30039 288 aaPredicted RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 SLC5A2P31639 672 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 MAPK9P45984 424 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 GPR3P46089 330 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 PPM1FP49593 454 aaPredicted RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 MAPK10P53779 464 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 PEX6Q13608 980 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 GPRC6AQ5T6X5 926 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 KCTD11Q693B1 232 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 CLEC14AQ86T13 490 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 PIM3Q86V86 326 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 TRAPPC5Q8IUR0 188 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 LRRC8AQ8IWT6 810 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 SLC38A3Q99624 504 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 ZMYND15Q9H091 742 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 CPNE5Q9HCH3 593 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTSA-210ENST00000606000 FOXJ2Q9P0K8 574 aa12.11□□□□□ -0.47
CTSA-210ENST00000606000 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
CTSA-210ENST00000606000 APC2O95996 2303 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 BPTFQ12830 3046 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 OR52A4PA6NMU1 304 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 GPR89AB7ZAQ6 455 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 LIASO43766 372 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 PRAMEF10O60809 474 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 GPR89BP0CG08 455 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 THRAP10827 490 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 ETS1P14921 441 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 TPH1P17752 444 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 LPOP22079 712 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 CLCNKAP51800 687 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 ZNF140P52738 457 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 LIMK2P53671 638 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 UBE2IP63279 158 aaKnown RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 CXADRP78310 365 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 XIAPP98170 497 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 SNX1Q13596 522 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 GTF2H3Q13889 308 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 TGIF1Q15583 401 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 MEI1Q5TIA1 1274 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 FAM83HQ6ZRV2 1179 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 SLC9B2Q86UD5 537 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 SLC13A5Q86YT5 568 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 BEND7Q8N7W2 519 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 GLIS1Q8NBF1 620 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 FCRL3Q96P31 734 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 BBC3Q96PG8 261 aaPredicted RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 TIMM29Q9BSF4 260 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 FAM96AQ9H5X1 160 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 PRORYQ9H606 182 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
CTSA-210ENST00000606000 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 CPNE7Q9UBL6 633 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 WDR37Q9Y2I8 494 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
CTSA-210ENST00000606000 LAMA5O15230 3695 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 C2orf81A6NN90 581 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 A8MU76 341 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 C9orf172C9J069 976 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 LDB2O43679 373 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms