RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ALDH9A1P49189 494 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 PPM1FP49593 454 aaPredicted RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 EPHB1P54762 984 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 MAT1AQ00266 395 aaKnown RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 SLC18A2Q05940 514 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 AQP6Q13520 282 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 SERINC3Q13530 473 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 GRAPQ13588 217 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 UBE2SQ16763 222 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 BTBD16Q32M84 506 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 ZNF484Q5JVG2 852 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 PTRHD1Q6GMV3 140 aaKnown RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 FRMD5Q7Z6J6 570 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 ALYREFQ86V81 257 aaKnown RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 RAB43Q86YS6 212 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 C7orf61Q8IZ16 206 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 CENPLQ8N0S6 344 aaPredicted RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 METTL4Q8N3J2 472 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 HUS1BQ8NHY5 278 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 EDARADDQ8WWZ3 215 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 SIGLEC10Q96LC7 697 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 CNOT6LQ96LI5 555 aaKnown RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 PPP1R36Q96LQ0 422 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 ZNF558Q96NG5 402 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 OR52B2Q96RD2 323 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 AGAP2Q99490 1192 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 FAM96AQ9H5X1 160 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 DUS2Q9NX74 493 aaKnown RBP8.81□□□□□ -1
COMMD3-215ENST00000602574 TAS2R9Q9NYW1 312 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 SH3BP4Q9P0V3 963 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 GIMAP2Q9UG22 337 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 POLLQ9UGP5 575 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 AFG3L2Q9Y4W6 797 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 PCDHGB1Q9Y5G3 927 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 SESN1Q9Y6P5 492 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 LAMB1P07942 1786 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 RREB1Q92766 1687 aa8.81□□□□□ -1
COMMD3-215ENST00000602574 SYNDIG1LA6NDD5 238 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 STX16O14662 325 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 DDX3YO15523 660 aaKnown RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 KCNH1O95259 989 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 QDPRP09417 244 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 MYCLP12524 364 aaPredicted RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
COMMD3-215ENST00000602574 KCNA5P22460 613 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 NUP62P37198 522 aaPredicted RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 ETV4P43268 484 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 PREPP48147 710 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 GPR143P51810 404 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 SUCLG1P53597 346 aaKnown RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 SLC25A3Q00325 362 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 TFCP2Q12800 502 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 FADDQ13158 208 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 PTGDRQ13258 359 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ZNF174Q15697 407 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 MICAQ29983 383 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 EPC2Q52LR7 807 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 KLHL26Q53HC5 615 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 HECTD3Q5T447 861 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 LRRC66Q68CR7 880 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 KRT39Q6A163 491 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 EFCAB12Q6NXP0 572 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ZNF517Q6ZMY9 492 aaPredicted RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 TPGS1Q6ZTW0 290 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 LNX2Q8N448 690 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 EIF4E3Q8N5X7 224 aaKnown RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 TOP1MTQ969P6 601 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 EXOSC8Q96B26 276 aaKnown RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 VCPIP1Q96JH7 1222 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 DMRTB1Q96MA1 342 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 GPR137Q96N19 417 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 FRMD8P1Q9BZ68 369 aaPredicted RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 OR51V1Q9H2C8 321 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 MINDY3Q9H8M7 445 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 COPS7BQ9H9Q2 264 aaPredicted RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 ASH2LQ9UBL3 628 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ADAMTS1Q9UHI8 967 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 NENFQ9UMX5 172 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 CSADQ9Y600 493 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 SIPA1L1O43166 1804 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 CROCCQ5TZA2 2017 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 H7C2Y5 167 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ZNF213O14771 459 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 UGDHO60701 494 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 RECKO95980 971 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 MMP1P03956 469 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 GP1BAP07359 652 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ZDHHC11BP0C7U3 371 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 RALBP11234 206 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 FCGR1AP12314 374 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 CTPS1P17812 591 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ATP2B4P23634 1241 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 POU1F1P28069 291 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 LAP3P28838 519 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 QARSP47897 775 aaKnown RBP8.8□□□□□ -1
COMMD3-215ENST00000602574 CDH8P55286 799 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 SEC13P55735 322 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ABATP80404 500 aa8.8□□□□□ -1
COMMD3-215ENST00000602574 ARHGAP8P85298 464 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms