RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PRSS21Q9Y6M0 314 aa22.33■■□□□ 1.16
IRF3-228ENST00000601291 LRRK1Q38SD2 2015 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 A6NNZ2 444 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 K7ESM1 405 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 ZNF217O75362 1048 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 KLHL2O95198 593 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 APBB3O95704 486 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 TOP3BO95985 862 aaKnown RBP22.32■■□□□ 1.16
IRF3-228ENST00000601291 PAK4O96013 591 aaPredicted RBP22.32■■□□□ 1.16
IRF3-228ENST00000601291 OXTRP30559 389 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 ACSL1P33121 698 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 TIAL1Q01085 375 aaKnown RBP eCLIP22.32■■□□□ 1.16
IRF3-228ENST00000601291 SIGLEC14Q08ET2 396 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 FAM83EQ2M2I3 478 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 TUBB8Q3ZCM7 444 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 CCDC153Q494R4 210 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 N4BP2L1Q5TBK1 243 aaPredicted RBP22.32■■□□□ 1.16
IRF3-228ENST00000601291 ADAMTSL4Q6UY14 1074 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 TRIM69Q86WT6 500 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 KCTD4Q8WVF5 259 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 ASB12Q8WXK4 309 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 FAM136AQ96C01 138 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 PAIP2Q9BPZ3 127 aaKnown RBP22.32■■□□□ 1.16
IRF3-228ENST00000601291 CAPS2Q9BXY5 557 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 MLXIPLQ9NP71 852 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 PLXNB3Q9ULL4 1909 aa22.32■■□□□ 1.16
IRF3-228ENST00000601291 MTX2O75431 263 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 WISP3O95389 354 aaPredicted RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 SEMA4FO95754 770 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 LTA4HP09960 611 aaKnown RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 ZNF37AP17032 561 aaPredicted RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 TEAD1P28347 426 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 MAGEA9P43362 315 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 PPP2CBP62714 309 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 PPP2CAP67775 309 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 GUCY1A3Q02108 690 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 IRF4Q15306 451 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 AGAP9Q5VTM2 703 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 KLC3Q6P597 504 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 TAX1BP1Q86VP1 789 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 CENPLQ8N0S6 344 aaPredicted RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 PLD6Q8N2A8 252 aaKnown RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 PELI3Q8N2H9 469 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 CENPTQ96BT3 561 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 HIC2Q96JB3 615 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 C1QTNF1Q9BXJ1 281 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 SARS2Q9NP81 518 aaKnown RBP22.31■■□□□ 1.16
IRF3-228ENST00000601291 CYP8B1Q9UNU6 501 aa22.31■■□□□ 1.16
IRF3-228ENST00000601291 IQCF5A8MTL0 148 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 DNAJC6O75061 913 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 TRIM16O95361 564 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 CCDC166P0CW27 439 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 MAT2AP31153 395 aaKnown RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 GMPRP36959 345 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 CBX1P83916 185 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 IL9RQ01113 521 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 FGL2Q14314 439 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 CSHL1Q14406 222 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 DET1Q7L5Y6 550 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 CCDC63Q8NA47 563 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 SIDT2Q8NBJ9 832 aaKnown RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 TP53I13Q8NBR0 393 aaPredicted RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 PLA2G15Q8NCC3 412 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 KLK6Q92876 244 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 UBXN10Q96LJ8 280 aa22.3■■□□□ 1.16
IRF3-228ENST00000601291 C12orf65Q9H3J6 166 aaKnown RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 CNOT6Q9ULM6 557 aaKnown RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 RUVBL2Q9Y230 463 aaKnown RBP22.3■■□□□ 1.16
IRF3-228ENST00000601291 MAGEC1O60732 1142 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 ASMTLO95671 621 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 APOA4P06727 396 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 ETV4P43268 484 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 CLCN7P51798 805 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 WDR4P57081 412 aaKnown RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 TMEM115Q12893 351 aaPredicted RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 MTAPQ13126 283 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 GTF2H3Q13889 308 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 PAQR3Q6TCH7 311 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 HEATR4Q86WZ0 1026 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 NKAPQ8N5F7 415 aaKnown RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 CAMKK1Q8N5S9 505 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 ARMC2Q8NEN0 867 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 CD200R1Q8TD46 325 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 NECAB3Q96P71 396 aaPredicted RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 LENG8Q96PV6 779 aaPredicted RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 NMRAL1Q9HBL8 299 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 SPATS2LQ9NUQ6 558 aaKnown RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 ZNF358Q9NW07 568 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 TMEM216Q9P0N5 145 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 DHRS7Q9Y394 339 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 PLIN3O60664 434 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 FTH1P02794 183 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 DCNP07585 359 aaKnown RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 KHDC1Q4VXA5 237 aaKnown RBP22.29■■□□□ 1.16
IRF3-228ENST00000601291 C16orf46Q6P387 395 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 TMEM207Q6UWW9 146 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 NAT14Q8WUY8 206 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 INPP5DQ92835 1189 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 NXNL1Q96CM4 212 aa22.29■■□□□ 1.16
IRF3-228ENST00000601291 SCYL1Q96KG9 808 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms