RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ZFYVE27Q5T4F4 411 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 LRRC38Q5VT99 294 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 AGAP9Q5VTM2 703 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 WASH2PQ6VEQ5 465 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 LRRTM4Q86VH4 590 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 OR8K1Q8NGG5 319 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 KIAA1143Q96AT1 154 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 EFHD1Q9BUP0 239 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 OSGEPL1Q9H4B0 414 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 GLOD4Q9HC38 313 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 WASH6PQ9NQA3 447 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 MAST4O15021 2626 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 VEGFDO43915 354 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 NDST3O95803 873 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 VIPP01282 170 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 PRKAR1AP10644 381 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 PTPN3P26045 913 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 CD68P34810 354 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 SH3BP2P78314 561 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 PCSK7Q16549 785 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 TAZQ16635 292 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 SKIDA1Q1XH10 827 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 PLA2G4EQ3MJ16 856 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 ATP1A1-AS1Q5TC04 95 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 TEKT5Q96M29 485 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 VPS35Q96QK1 796 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 CHP1Q99653 195 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 GPR63Q9BZJ6 419 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 EPN3Q9H201 632 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 ZNF768Q9H5H4 540 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 DNAJC16Q9Y2G8 782 aa17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 MRPS18BQ9Y676 258 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 SPENQ96T58 3664 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-208ENST00000601220 LOC285095A0A1B0GVY8 99 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 GOLGA6L19H0YKK7 550 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 KIF1CO43896 1103 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 CDK14O94921 469 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 ZFXP17010 805 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 RPL10P27635 214 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 CA5AP35218 305 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 WASHC5Q12768 1159 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 PRKD1Q15139 912 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 INSCQ1MX18 579 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 ATP13A5Q4VNC0 1218 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 COLEC12Q5KU26 742 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 MFSD7Q6UXD7 560 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 TTC30BQ8N4P2 665 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 ESX1Q8N693 406 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 DTX3LQ8TDB6 740 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 KLHL6Q8WZ60 621 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 STARD8Q92502 1023 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 RSC1A1Q92681 617 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 TGM7Q96PF1 710 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 MAK16Q9BXY0 300 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 BPIFA1Q9NP55 256 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 POT1Q9NUX5 634 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 WDR37Q9Y2I8 494 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 RPS6KL1Q9Y6S9 549 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 RELNP78509 3460 aa17.69■□□□□ 0.42
CHMP2A-208ENST00000601220 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 OR52A4PA6NMU1 304 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 PPP1R12AO14974 1030 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 PMPCBO75439 489 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 SLC4A1P02730 911 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 HMGCLP35914 325 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 FOXM1Q08050 763 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 TMEM115Q12893 351 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 TCEAL1Q15170 157 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 DEFB109BQ30KR1 87 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 KDELC1Q6UW63 502 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 PRSS42Q7Z5A4 293 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 RFX6Q8HWS3 928 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 APOBEC4Q8WW27 367 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 RNF31Q96EP0 1072 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 ABHD17AQ96GS6 310 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 SRPK1Q96SB4 655 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 RAB33BQ9H082 229 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 IL26Q9NPH9 171 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 ZNF71Q9NQZ8 489 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 SPTLC3Q9NUV7 552 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 UBP1Q9NZI7 540 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 SEMA5BQ9P283 1151 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 SAE1Q9UBE0 346 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 EPHA6Q9UF33 1036 aa17.68■□□□□ 0.42
CHMP2A-208ENST00000601220 A0A0A6YYK5 440 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 PDZK1P1A8MUH7 402 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 AKR1B10O60218 316 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 KRT1P04264 644 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 FGF5P12034 268 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 AMD1P17707 334 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 IDSP22304 550 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 CASRP41180 1078 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 CDKN2BP42772 138 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 CAPZBP47756 277 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms