RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MMP20O60882 483 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 KLF8O95600 359 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 DRD3P35462 400 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 RPS14P62263 151 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 NLRP8Q86W28 1048 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 CRLF3Q8IUI8 442 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 AADATQ8N5Z0 425 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 CXorf40AQ8TE69 158 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 BTN2A2Q8WVV5 523 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 KIAA1191Q96A73 305 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 DCUN1D1Q96GG9 259 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 PDLIM5Q96HC4 596 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 MYCBPQ99417 103 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SARS2Q9NP81 518 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SLC2A4RGQ9NR83 387 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 KLHL14Q9P2G3 628 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 KLHL42Q9P2K6 505 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 CFAP99D6REC4 459 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 TSPAN6O43657 245 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 RECQL5O94762 991 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 SLC25A14O95258 325 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 TRIM16O95361 564 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 OR56A5P0C7T3 313 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 SRFP11831 508 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 C6P13671 934 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 COPAP53621 1224 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 DNAJB13P59910 316 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 ABCE1P61221 599 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 B4GALNT1Q00973 533 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 TDGQ13569 410 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 FBXO43Q4G163 708 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 LDLRAP1Q5SW96 308 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 HDDC3Q8N4P3 179 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 TXNDC5Q8NBS9 432 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 DDHD1Q8NEL9 900 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 GIMAP7Q8NHV1 300 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 STAG3L4Q8TBR4 150 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 PTERQ96BW5 349 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 SGF29Q96ES7 293 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 PANX3Q96QZ0 392 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 PLCD4Q9BRC7 762 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 GATA5Q9BWX5 397 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 TRIM55Q9BYV6 548 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 SPATS2LQ9NUQ6 558 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 ARL2BPQ9Y2Y0 163 aa17.45■□□□□ 0.38
SHKBP1-224ENST00000600718 FADS2P1A8MWK0 482 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 NARSO43776 548 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 ADAM23O75077 832 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 ATP1B2P14415 290 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 HOXB2P14652 356 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 CRY1Q16526 586 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 PUS10Q3MIT2 529 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 SLC44A4Q53GD3 710 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 KIAA1211LQ6NV74 962 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 SLC22A9Q8IVM8 553 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 EEF1AKMT1Q8WVE0 214 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 NUS1Q96E22 293 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 LINGO1Q96FE5 620 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 C20orf27Q9GZN8 174 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 C5orf42Q9H799 3197 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 ITM2AO43736 263 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 MAGEC1O60732 1142 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 AP2A2O94973 939 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 TSPAN12O95859 305 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 TPBGLP0DKB5 382 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 MSH3P20585 1137 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 AKT1P31749 480 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 KCNC1P48547 511 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 DPTQ07507 201 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 OVGP1Q12889 678 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 HSF5Q4G112 596 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 IER5LQ5T953 404 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 AGBL4Q5VU57 503 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 PPP4R1Q8TF05 950 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 FAM3CQ92520 227 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 GLYATL1Q969I3 302 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 GUCD1Q96NT3 240 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 ZNF395Q9H8N7 513 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 COQ6Q9Y2Z9 468 aa17.44■□□□□ 0.38
SHKBP1-224ENST00000600718 A0A1W2PQF6 199 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 SMIM24O75264 130 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 DGKAP23743 735 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 RGS4P49798 205 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 NAGLUP54802 743 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 OR4D1Q15615 310 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 NAPRTQ6XQN6 538 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 NPHS2Q9NP85 383 aa17.43■□□□□ 0.38
SHKBP1-224ENST00000600718 KERAO60938 352 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 IPO13O94829 963 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 ITGB6P18564 788 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 TAS2R38P59533 333 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 TTLL9Q3SXZ7 439 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 TMPRSS6Q8IU80 811 aa17.42■□□□□ 0.38
SHKBP1-224ENST00000600718 ZBTB2Q8N680 514 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms