RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 KATNA1O75449 491 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 RFPL1O75677 317 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 SERPINC1P01008 464 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 FAM228BP0C875 321 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 FGF5P12034 268 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 CAPZBP47756 277 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 LEPRP48357 1165 aaKnown RBP16.91■□□□□ 0.3
SMG9-210ENST00000600097 SH3BP2P78314 561 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 IFI35P80217 286 aaPredicted RBP16.91■□□□□ 0.3
SMG9-210ENST00000600097 PPIDQ08752 370 aaKnown RBP16.91■□□□□ 0.3
SMG9-210ENST00000600097 SLC10A2Q12908 348 aaPredicted RBP16.91■□□□□ 0.3
SMG9-210ENST00000600097 GALNT3Q14435 633 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 NFKBIBQ15653 356 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMG9-210ENST00000600097 ZNF648Q5T619 568 aaPredicted RBP16.91■□□□□ 0.3
SMG9-210ENST00000600097 ALS2CLQ60I27 953 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 WASH2PQ6VEQ5 465 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 TMC3Q7Z5M5 1100 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 CNTD1Q8N815 330 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 LRRN4Q8WUT4 740 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 KLHL6Q8WZ60 621 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 WASH6PQ9NQA3 447 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 EPHA6Q9UF33 1036 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 LCMT1Q9UIC8 334 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 LNPEPQ9UIQ6 1025 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 PADI1Q9ULC6 663 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 DNAJC16Q9Y2G8 782 aa16.91■□□□□ 0.3
SMG9-210ENST00000600097 SYCE3A1L190 88 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SPAG6O75602 509 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 PROSCO94903 275 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 CDK14O94921 469 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 VCLP18206 1134 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 IDSP22304 550 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 PMS2P54278 862 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SEPT7Q16181 437 aaKnown RBP16.9■□□□□ 0.3
SMG9-210ENST00000600097 PLA2G4EQ3MJ16 856 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 AGAP9Q5VTM2 703 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 ASB18Q6ZVZ8 466 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 PPP1R3BQ86XI6 285 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 CXorf40BQ96DE9 158 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 IQCDQ96DY2 449 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 TRIB3Q96RU7 358 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SRPK1Q96SB4 655 aaKnown RBP16.9■□□□□ 0.3
SMG9-210ENST00000600097 GPR63Q9BZJ6 419 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 XPO4Q9C0E2 1151 aaKnown RBP16.9■□□□□ 0.3
SMG9-210ENST00000600097 RAB33BQ9H082 229 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SLC40A1Q9NP59 571 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 UVRAGQ9P2Y5 699 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 SHOC2Q9UQ13 582 aa16.9■□□□□ 0.3
SMG9-210ENST00000600097 USP9YO00507 2555 aaPredicted RBP16.89■□□□□ 0.3
SMG9-210ENST00000600097 RELNP78509 3460 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 C21orf140B9A014 251 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 MTSS1O43312 755 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 CREG1O75629 220 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 FURINP09958 794 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 BRAFP15056 766 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 NELFEP18615 380 aaKnown RBP16.89■□□□□ 0.29
SMG9-210ENST00000600097 NR1D1P20393 614 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 RPL10P27635 214 aaKnown RBP16.89■□□□□ 0.29
SMG9-210ENST00000600097 ZBED6P86452 979 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 ZBTB17Q13105 803 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 DNASE1L3Q13609 305 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 GPR18Q14330 331 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 ZFYVE27Q5T4F4 411 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 NT5DC3Q86UY8 548 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 RSC1A1Q92681 617 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 IMP4Q96G21 291 aaKnown RBP16.89■□□□□ 0.29
SMG9-210ENST00000600097 ELMO2Q96JJ3 720 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 FCRL4Q96PJ5 515 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 RNF157Q96PX1 679 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 PSMG3-AS1Q96PY0 264 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 TWSG1Q9GZX9 223 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 PDE7BQ9NP56 450 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 ZNF711Q9Y462 761 aa16.89■□□□□ 0.29
SMG9-210ENST00000600097 PIPSLA2A3N6 862 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 CDC14CA4D256 554 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 K7EM74 188 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 KIF1CO43896 1103 aaKnown RBP16.88■□□□□ 0.29
SMG9-210ENST00000600097 KCNJ13O60928 360 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 SLC4A1P02730 911 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 PIRTP0C851 137 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 CASP14P31944 242 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 TAS2R40P59535 323 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 CDK18Q07002 472 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 SLC14A2Q15849 920 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 CCDC70Q6NSX1 233 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 IRGCQ6NXR0 463 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 BPHLQ86WA6 291 aaPredicted RBP16.88■□□□□ 0.29
SMG9-210ENST00000600097 ZNF547Q8IVP9 402 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 APLFQ8IW19 511 aaPredicted RBP16.88■□□□□ 0.29
SMG9-210ENST00000600097 UBXN4Q92575 508 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 VPS35Q96QK1 796 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 SLC25A51Q9H1U9 297 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 LHX9Q9NQ69 397 aa16.88■□□□□ 0.29
SMG9-210ENST00000600097 TLK1Q9UKI8 766 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms