RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 C6orf163Q5TEZ5 329 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 KANK2Q63ZY3 851 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 ANKS6Q68DC2 871 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 PTRHD1Q6GMV3 140 aaKnown RBP14.32□□□□□ -0.12
VRK3-217ENST00000599538 CERS6Q6ZMG9 384 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 UBE2Q1Q7Z7E8 422 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 RBM23Q86U06 439 aaKnown RBP14.32□□□□□ -0.12
VRK3-217ENST00000599538 GPSM1Q86YR5 675 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 ADGRG2Q8IZP9 1017 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 STK40Q8N2I9 435 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 SCRN2Q96FV2 425 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 CDRT15Q96T59 188 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 CLPBQ9H078 707 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 MTG2Q9H4K7 406 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 NMRK1Q9NWW6 199 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 STOML1Q9UBI4 398 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 PRKAG2Q9UGJ0 569 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 EIF2B4Q9UI10 523 aaKnown RBP14.32□□□□□ -0.12
VRK3-217ENST00000599538 PCTPQ9UKL6 214 aa14.32□□□□□ -0.12
VRK3-217ENST00000599538 GRXCR1A8MXD5 290 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 FBP2O00757 339 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 GPC4O75487 556 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 TRIM16O95361 564 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
VRK3-217ENST00000599538 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
VRK3-217ENST00000599538 ANPEPP15144 967 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 CEBPBP17676 345 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 PFKLP17858 780 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 ACRV1P26436 265 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 WEE1P30291 646 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 THOP1P52888 689 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 LCP2Q13094 533 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 PTK2BQ14289 1009 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 FASTKQ14296 549 aaKnown RBP14.31□□□□□ -0.12
VRK3-217ENST00000599538 HERC3Q15034 1050 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 AGKQ53H12 422 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 LRRC74BQ6ZQY2 392 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 SYVN1Q86TM6 617 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 PHYKPLQ8IUZ5 450 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 ST13P5Q8NFI4 369 aaPredicted RBP14.31□□□□□ -0.12
VRK3-217ENST00000599538 CYB5D2Q8WUJ1 264 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 CD274Q9NZQ7 290 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 MBD1Q9UIS9 605 aaPredicted RBP14.31□□□□□ -0.12
VRK3-217ENST00000599538 UNC80Q8N2C7 3258 aa14.31□□□□□ -0.12
VRK3-217ENST00000599538 SYCE1LA8MT33 242 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 PSMD12O00232 456 aaPredicted RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 SLC25A14O95258 325 aaPredicted RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 ZNF7P17097 686 aaPredicted RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 ITGALP20701 1170 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 NME5P56597 212 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 CEACAM7Q14002 265 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 CARD16Q5EG05 197 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 FAM109BQ6ICB4 259 aaPredicted RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 PAOXQ6QHF9 649 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 SBSNQ6UWP8 590 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 DDIASQ8IXT1 998 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ZNF483Q8TF39 744 aaPredicted RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.3□□□□□ -0.12
VRK3-217ENST00000599538 ISG20Q96AZ6 181 aaKnown RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 CDK15Q96Q40 435 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 LYSMD1Q96S90 227 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 WDR41Q9HAD4 459 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 CRLS1Q9UJA2 301 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 LRRC42Q9Y546 428 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 PCDHB1Q9Y5F3 818 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 PLXNB3Q9ULL4 1909 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 C9JVG2 144 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 E2F3O00716 465 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 SPAM1P38567 509 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 SQLEQ14534 574 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 TAF11Q15544 211 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ARHGAP15Q53QZ3 475 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 TPRG1Q6ZUI0 275 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 METTL3Q86U44 580 aaKnown RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 FUNDC1Q8IVP5 155 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 KBTBD2Q8IY47 623 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 RBFAQ8N0V3 343 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 PCDH20Q8N6Y1 951 aaKnown RBP14.3□□□□□ -0.12
VRK3-217ENST00000599538 OR52B6Q8NGF0 335 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 OR2A12Q8NGT7 310 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 SLC26A7Q8TE54 656 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 HERVK_113Q902F9 699 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ASB2Q96Q27 587 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ACOX2Q99424 681 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 SLC25A13Q9UJS0 675 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 APPL1Q9UKG1 709 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 ADAMTS6Q9UKP5 1117 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 COMMD10Q9Y6G5 202 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 TRANK1O15050 2925 aa14.3□□□□□ -0.12
VRK3-217ENST00000599538 VGLL3A8MV65 326 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 STX16O14662 325 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 BAG2O95816 211 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 XRCC1P18887 633 aaPredicted RBP14.29□□□□□ -0.12
VRK3-217ENST00000599538 RPS3P23396 243 aaKnown RBP eCLIP14.29□□□□□ -0.12
VRK3-217ENST00000599538 GCKP35557 465 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 ATP13A5Q4VNC0 1218 aa14.29□□□□□ -0.12
VRK3-217ENST00000599538 PIGGQ5H8A4 983 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms