RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SEMA6CQ9H3T2 930 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 PRDM8Q9NQV8 689 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 SLC23A2Q9UGH3 650 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 KCTD3Q9Y597 815 aa22.29■■□□□ 1.16
CCDC9-204ENST00000599398 METTL18O95568 372 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 CRTAMO95727 393 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 JMJD7P0C870 316 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 F3P13726 295 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 HGFP14210 728 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 CD1CP29017 333 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 CCZ1BP86790 482 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 CCZ1P86791 482 aaPredicted RBP22.28■■□□□ 1.16
CCDC9-204ENST00000599398 ZFP36L1Q07352 338 aaKnown RBP22.28■■□□□ 1.16
CCDC9-204ENST00000599398 P3H1Q32P28 736 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 LDLRAP1Q5SW96 308 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 SLC9B2Q86UD5 537 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 SLC13A5Q86YT5 568 aaPredicted RBP22.28■■□□□ 1.16
CCDC9-204ENST00000599398 SLITRK4Q8IW52 837 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 AHCYL2Q96HN2 611 aaKnown RBP22.28■■□□□ 1.16
CCDC9-204ENST00000599398 LOXL2Q9Y4K0 774 aa22.28■■□□□ 1.16
CCDC9-204ENST00000599398 ITPR1Q14643 2758 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 IGHV1OR21-1A0A087WYE8 117 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 KIR2DS5A0A0G2JLQ3 304 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 A0A0G2JNG1 304 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 A6NCN8 305 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 KIR2DS3K7RE56 304 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 GAPDHSO14556 408 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-204ENST00000599398 PRAMEF1O95521 474 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 CLCNKAP51800 687 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 PDE1BQ01064 536 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 KIR2DS5Q14953 304 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 SEPT7Q16181 437 aaKnown RBP22.27■■□□□ 1.16
CCDC9-204ENST00000599398 CLPPQ16740 277 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-204ENST00000599398 GPRC6AQ5T6X5 926 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF662Q6ZS27 426 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF547Q8IVP9 402 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 ZNF398Q8TD17 642 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 TIMM29Q9BSF4 260 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 LRRC40Q9H9A6 602 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 SARS2Q9NP81 518 aaKnown RBP22.27■■□□□ 1.16
CCDC9-204ENST00000599398 PISDQ9UG56 409 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 FEZ2Q9UHY8 353 aaPredicted RBP22.27■■□□□ 1.16
CCDC9-204ENST00000599398 FKBPLQ9UIM3 349 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 BPTFQ12830 3046 aa22.27■■□□□ 1.16
CCDC9-204ENST00000599398 NBEAQ8NFP9 2946 aa22.27■■□□□ 1.15
CCDC9-204ENST00000599398 ZNF106Q9H2Y7 1883 aaKnown RBP22.26■■□□□ 1.15
CCDC9-204ENST00000599398 OR5K4A6NMS3 321 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 PDZK1P1A8MUH7 402 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 LIASO43766 372 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 ITGA2BP08514 1039 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 VCLP18206 1134 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 AKT1P31749 480 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 CA5AP35218 305 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 MLLT3P42568 568 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-204ENST00000599398 GPLD1P80108 840 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 TMPRSS15P98073 1019 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-204ENST00000599398 DENND5AQ6IQ26 1287 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 JAMLQ86YT9 394 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 DDHD1Q8NEL9 900 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 OR13C4Q8NGS5 318 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 OR10G6Q8NH81 332 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 C1orf54Q8WWF1 131 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 SH3KBP1Q96B97 665 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 CMKLR1Q99788 373 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 FRMD8P1Q9BZ68 369 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-204ENST00000599398 ARNT2Q9HBZ2 717 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 AKAP7Q9P0M2 348 aaPredicted RBP22.26■■□□□ 1.15
CCDC9-204ENST00000599398 ZNF148Q9UQR1 794 aa22.26■■□□□ 1.15
CCDC9-204ENST00000599398 CDRT15L2A8MXV6 281 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 IFNB1P01574 187 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 MSH3P20585 1137 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 STIP1P31948 543 aaKnown RBP22.25■■□□□ 1.15
CCDC9-204ENST00000599398 MAPK9P45984 424 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 SNX1Q13596 522 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 KCTD11Q693B1 232 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 ZNF574Q6ZN55 896 aaPredicted RBP22.25■■□□□ 1.15
CCDC9-204ENST00000599398 TRIM48Q8IWZ4 208 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 SPACA3Q8IXA5 215 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 KLHDC8BQ8IXV7 354 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 RASGEF1AQ8N9B8 481 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 AVL9Q8NBF6 648 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 KCNE4Q8WWG9 221 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 TMEM159Q96B96 161 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 CRELD1Q96HD1 420 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 CCDC74BQ96LY2 380 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 ASB8Q9H765 288 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 SMOXQ9NWM0 555 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 CPNE7Q9UBL6 633 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 PTPRQQ9UMZ3 2332 aa22.25■■□□□ 1.15
CCDC9-204ENST00000599398 IGHV5-10-1A0A0J9YXX1 117 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 PSMD3O43242 534 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 DUX1O43812 170 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 SRP72O76094 671 aaKnown RBP22.24■■□□□ 1.15
CCDC9-204ENST00000599398 HOXB3P14651 431 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-204ENST00000599398 TPH1P17752 444 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 ITIH1P19827 911 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 IDSP22304 550 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 MPSTP25325 297 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 RPL10P27635 214 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms